RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 HOXB1P14653 301 aaPredicted RBP18.3■□□□□ 0.52
CHFR-217ENST00000540537 UBE2NP61088 152 aaKnown RBP18.3■□□□□ 0.52
CHFR-217ENST00000540537 C3orf36Q3SXR2 165 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 ANKRD16Q6P6B7 361 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 SMYD1Q8NB12 490 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 RNF217Q8TC41 542 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 SLC41A3Q96GZ6 507 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 SLC38A2Q96QD8 506 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 ARHGDIGQ99819 225 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 TMEM43Q9BTV4 400 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 ASPNQ9BXN1 380 aa18.3■□□□□ 0.52
CHFR-217ENST00000540537 KAT8Q9H7Z6 458 aaKnown RBP18.3■□□□□ 0.52
CHFR-217ENST00000540537 IGHV1-18A0A0C4DH31 117 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 H7C417 338 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 M0QX08 132 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 TRAF3IP2O43734 574 aaPredicted RBP18.29■□□□□ 0.52
CHFR-217ENST00000540537 BGLAPP02818 100 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 PCSK6P29122 969 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 APOBEC3AP31941 199 aaPredicted RBP18.29■□□□□ 0.52
CHFR-217ENST00000540537 NUDT6P53370 316 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 CDH12P55289 794 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 PPP2R2BQ00005 443 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 KRTAP1-1Q07627 177 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 ZNF613Q6PF04 617 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 SCAIQ8N9R8 606 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 PIK3C3Q8NEB9 887 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 NELFAQ9H3P2 528 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 CRNNQ9UBG3 495 aaPredicted RBP18.29■□□□□ 0.52
CHFR-217ENST00000540537 MOKQ9UQ07 419 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 ARFGEF3Q5TH69 2177 aa18.29■□□□□ 0.52
CHFR-217ENST00000540537 M0R3H8 397 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 SSX4O60224 188 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 OPN1SWP03999 348 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 CBLP22681 906 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 PCGF2P35227 344 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 IL1RL1Q01638 556 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 CHRNB3Q05901 458 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 DUSP7Q16829 419 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 PATL1Q86TB9 770 aaKnown RBP18.28■□□□□ 0.52
CHFR-217ENST00000540537 UEVLDQ8IX04 471 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 TMEM123Q8N131 208 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 GPR137CQ8N3F9 429 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 FAM169BQ8N8A8 192 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 GPR32P1Q8NGA4 272 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 OR2M2Q96R28 347 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 MCHR1Q99705 422 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 KATNB1Q9BVA0 655 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 TMEM120AQ9BXJ8 343 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 GPR35Q9HC97 309 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 MRGBPQ9NV56 204 aa18.28■□□□□ 0.52
CHFR-217ENST00000540537 SONP18583 2426 aaKnown RBP18.28■□□□□ 0.52
CHFR-217ENST00000540537 A0A096LPE4 126 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 A0A1W2PPZ6 126 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 INAFM1C9JVW0 142 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 MS4A18H0YCH9 400 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 HPRP00739 348 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 BMP4P12644 408 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 NQO1P15559 274 aaKnown RBP18.27■□□□□ 0.52
CHFR-217ENST00000540537 ARF1P84077 181 aaKnown RBP18.27■□□□□ 0.52
CHFR-217ENST00000540537 RAB35Q15286 201 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 TRMT5Q32P41 509 aaKnown RBP18.27■□□□□ 0.52
CHFR-217ENST00000540537 MS4A18Q3C1V0 323 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 INTS11Q5TA45 600 aaKnown RBP18.27■□□□□ 0.52
CHFR-217ENST00000540537 LINC00114Q6XXX2 140 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 MAPK1IP1LQ8NDC0 245 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 OR6T1Q8NGN1 323 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 OR10A6Q8NH74 314 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 KCNS3Q9BQ31 491 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 RHNO1Q9BSD3 238 aa18.27■□□□□ 0.52
CHFR-217ENST00000540537 MRPL39Q9NYK5 338 aaKnown RBP18.27■□□□□ 0.52
CHFR-217ENST00000540537 FBP2O00757 339 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 CHP2O43745 196 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 MT-ATP6P00846 226 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 IGLV1-44P01699 117 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 CRYAAP02489 173 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 DSCR9P59020 149 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 TUBA1BP68363 451 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 TUBA4AP68366 448 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 PUDPQ08623 228 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 PMS2P3Q13401 168 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
CHFR-217ENST00000540537 NPTX1Q15818 432 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 CEACAM16Q2WEN9 425 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 TUBA1AQ71U36 451 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 MOGAT1Q96PD6 335 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 CRLF2Q9HC73 371 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 NOX1Q9Y5S8 564 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 PMF1-BGLAPU3KQ54 211 aa18.26■□□□□ 0.51
CHFR-217ENST00000540537 ANK3Q12955 4377 aaKnown RBP18.26■□□□□ 0.51
CHFR-217ENST00000540537 IGKV3-15P01624 115 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 TROVE2P10155 538 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHFR-217ENST00000540537 HLA-DOBP13765 273 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 CD247P20963 164 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 GZMMP51124 257 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 NAAAQ02083 359 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 POU3F1Q03052 451 aaPredicted RBP18.25■□□□□ 0.51
CHFR-217ENST00000540537 SWI5Q1ZZU3 235 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 VMACQ2NL98 169 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 ENTPD8Q5MY95 495 aa18.25■□□□□ 0.51
CHFR-217ENST00000540537 CLEC2AQ6UVW9 174 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms