RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 EVA1AQ9H8M9 152 aa7.88□□□□□ -1.15
LMO3-222ENST00000540445 BARX1Q9HBU1 254 aaPredicted RBP7.88□□□□□ -1.15
LMO3-222ENST00000540445 OBP2BQ9NPH6 170 aa7.88□□□□□ -1.15
LMO3-222ENST00000540445 PMF1-BGLAPU3KQ54 211 aa7.88□□□□□ -1.15
LMO3-222ENST00000540445 RTTNQ86VV8 2226 aa7.88□□□□□ -1.15
LMO3-222ENST00000540445 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
LMO3-222ENST00000540445 CPSF4LA6NMK7 179 aaKnown RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 ZNF726A6NNF4 738 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 ATP6V1G2-DDX39BF2Z307 99 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 MS4A18H0YCH9 400 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 M0R3H8 397 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 AKAP8O43823 692 aaKnown RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 TPST2O60704 377 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 SERPINI2O75830 405 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 SASH3O75995 380 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 OR6A2O95222 327 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 CRYAAP02489 173 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 C8BP07358 591 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TROVE2P10155 538 aaKnown RBP eCLIP7.87□□□□□ -1.15
LMO3-222ENST00000540445 PAX7P23759 505 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 CAPZA2P47755 286 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TUBA1BP68363 451 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TUBA4AP68366 448 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 ARF1P84077 181 aaKnown RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 DUSP7Q16829 419 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 MS4A18Q3C1V0 323 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TBRG1Q3YBR2 411 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 ZNF544Q6NX49 715 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 ANKRD16Q6P6B7 361 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TTC33Q6PID6 262 aaPredicted RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 B3GLCTQ6Y288 498 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 DNM1P46Q6ZS02 220 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TUBA1AQ71U36 451 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 LINGO2Q7L985 606 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 PRIMA1Q86XR5 153 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 PTOV1Q86YD1 416 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 SLC30A8Q8IWU4 369 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 PIK3C3Q8NEB9 887 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 VANGL1Q8TAA9 524 aaPredicted RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 STON2Q8WXE9 905 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 BCL2L2Q92843 193 aaPredicted RBP7.87□□□□□ -1.15
LMO3-222ENST00000540445 FBXO17Q96EF6 278 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 SH3GL1Q99961 368 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 ECSITQ9BQ95 431 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 WFDC6Q9BQY6 131 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 EMC6Q9BV81 110 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 TMEM120AQ9BXJ8 343 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 CRLF2Q9HC73 371 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 GPR35Q9HC97 309 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 CORINQ9Y5Q5 1042 aa7.87□□□□□ -1.15
LMO3-222ENST00000540445 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 CUBNO60494 3623 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 SONP18583 2426 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 IGKV1D-42A0A075B6H8 117 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 A0A0B4J2E0 115 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 IGHV1-18A0A0C4DH31 117 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 A0A1B0GX12 115 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 VSTM5A8MXK1 200 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 C11orf98E9PRG8 122 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 M0R3G1 203 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 HIST1H2ABP04908 130 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 VIMP08670 466 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 ADORA3P0DMS8 318 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 HLA-DOBP13765 273 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 ARFIP2P53365 341 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 SH3BGRP55822 239 aaPredicted RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 POU3F1Q03052 451 aaPredicted RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 CAMK2DQ13557 499 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 CEACAM16Q2WEN9 425 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 ENTPD8Q5MY95 495 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 INTS11Q5TA45 600 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 NANOGP8Q6NSW7 305 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 VHLLQ6RSH7 139 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 CLEC2AQ6UVW9 174 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 HIST3H2AQ7L7L0 130 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 PATL1Q86TB9 770 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 OR6T1Q8NGN1 323 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 RASSF5Q8WWW0 418 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 HIST1H2ACQ93077 130 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 BOD1Q96IK1 185 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 MOGAT1Q96PD6 335 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 SLC38A2Q96QD8 506 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 VRK1Q99986 396 aaPredicted RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 ZNF385DQ9H6B1 395 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 KAT8Q9H7Z6 458 aaKnown RBP7.86□□□□□ -1.15
LMO3-222ENST00000540445 NANOGQ9H9S0 305 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 B3GAT2Q9NPZ5 323 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 KLHL14Q9P2G3 628 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 B3GAT1Q9P2W7 334 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 RCE1Q9Y256 329 aa7.86□□□□□ -1.15
LMO3-222ENST00000540445 ARPC4-TTLL3A0A0A6YYG9 625 aa7.85□□□□□ -1.15
LMO3-222ENST00000540445 LOC100653049A0A140TA62 436 aa7.85□□□□□ -1.15
LMO3-222ENST00000540445 LOC102725191A0A1B0GVB3 256 aa7.85□□□□□ -1.15
LMO3-222ENST00000540445 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
LMO3-222ENST00000540445 LRRN3E7EW58 273 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms