RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 MUS81Q96NY9 551 aa11.79□□□□□ -0.52
CCDC130-202ENST00000540216 MAGEL2Q9UJ55 1249 aa11.79□□□□□ -0.52
CCDC130-202ENST00000540216 SAMD4AQ9UPU9 718 aaKnown RBP11.79□□□□□ -0.52
CCDC130-202ENST00000540216 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 CH25HO95992 272 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HPRP00739 348 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 MT-ND1P03886 318 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HIST1H2ABP04908 130 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 ADORA3P0DMS8 318 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 PAX7P23759 505 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HOXC12P31275 282 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 SELENOPP49908 381 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 SH3BGRP55822 239 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-202ENST00000540216 POU3F1Q03052 451 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-202ENST00000540216 GABRA6Q16445 453 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 SEZ6L2Q6UXD5 910 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HIST3H2AQ7L7L0 130 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 PIK3C3Q8NEB9 887 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 TMEM255BQ8WV15 326 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 MBD6Q96DN6 1003 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 TMEM204Q9BSN7 226 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 FNDC11Q9BVV2 318 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 GORASP2Q9H8Y8 452 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 OBP2BQ9NPH6 170 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 MEPEQ9NQ76 525 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-202ENST00000540216 DCAF13Q9NV06 445 aaKnown RBP11.78□□□□□ -0.52
CCDC130-202ENST00000540216 EGFL7Q9UHF1 273 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 A4GNTQ9UNA3 340 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 AMDHD2Q9Y303 409 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 MED31Q9Y3C7 131 aa11.78□□□□□ -0.52
CCDC130-202ENST00000540216 MAGED1Q9Y5V3 778 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-202ENST00000540216 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.52
CCDC130-202ENST00000540216 LRRN3E7EW58 273 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 RPL36A-HNRNPH2H7BZ11 118 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 KPNA4O00629 521 aaPredicted RBP11.77□□□□□ -0.53
CCDC130-202ENST00000540216 CD3EP07766 207 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ASAH2BP0C7U1 165 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 UMPSP11172 480 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 NCK1P16333 377 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 AHCYP23526 432 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 IST1P53990 364 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
CCDC130-202ENST00000540216 SLC25A3Q00325 362 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ZP4Q12836 540 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 KEAP1Q14145 624 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ALKBH2Q6NS38 261 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ZNF704Q6ZNC4 412 aaPredicted RBP11.77□□□□□ -0.53
CCDC130-202ENST00000540216 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 SLC46A3Q7Z3Q1 461 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 NANOGNBQ7Z5D8 188 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 CYP4Z1Q86W10 505 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 NKAIN4Q8IVV8 208 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 TMEM123Q8N131 208 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ARHGAP24Q8N264 748 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 RNF148Q8N7C7 305 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 LIPHQ8WWY8 451 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 SGTBQ96EQ0 304 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 NSL1Q96IY1 281 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 LRR1Q96L50 414 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ALKBH3Q96Q83 286 aaPredicted RBP11.77□□□□□ -0.53
CCDC130-202ENST00000540216 OR2M2Q96R28 347 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 CDRT15Q96T59 188 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 LIME1Q9H400 295 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ANKRD19PQ9H560 264 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 CD300AQ9UGN4 299 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 RNF115Q9Y4L5 304 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 SLC25A15Q9Y619 301 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.53
CCDC130-202ENST00000540216 UPK3AO75631 287 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 OR7A10O76100 309 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 ATE1O95260 518 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 WNT11O96014 354 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 CALB2P22676 271 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 UGT2B15P54855 530 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 TRAM2Q15035 370 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 C9orf135Q5VTT2 229 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 HMBOX1Q6NT76 420 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 ADAM5Q6NVV9 412 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 KLHL17Q6TDP4 642 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 TMEM108Q6UXF1 575 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 NHLRC1Q6VVB1 395 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 OR1K1Q8NGR3 316 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 OR52N5Q8NH56 324 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 ADAD1Q96M93 576 aaKnown RBP11.76□□□□□ -0.53
CCDC130-202ENST00000540216 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 FOXC2Q99958 501 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 MOV10Q9HCE1 1003 aaKnown RBP11.76□□□□□ -0.53
CCDC130-202ENST00000540216 B3GAT2Q9NPZ5 323 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 SLC17A5Q9NRA2 495 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms