RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CD38P28907 300 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 RBMS1P29558 406 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 PRPS1P60891 318 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 IL13RA1P78552 427 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FZD2Q14332 565 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GK2Q14410 553 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 TSC22D1Q15714 1073 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 MBOAT2Q6ZWT7 520 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 VASH1Q7L8A9 365 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 VN1R4Q7Z5H5 301 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF417Q8TAU3 575 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM234Q8WY98 164 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 ELP4Q96EB1 424 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 CNRIP1Q96F85 164 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FAM71F1Q96KD3 344 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DOK1Q99704 481 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 MICU1Q9BPX6 476 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 AIFM2Q9BRQ8 373 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 NIPAL2Q9H841 368 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 C2orf42Q9NWW7 574 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 A0A0B4J203 849 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 HRO43593 1189 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 CTSVO60911 334 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 UBL3O95164 117 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GPR75O95800 540 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 PGCP20142 388 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 NUDT1P36639 197 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DLSTP36957 453 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 TSFMP43897 325 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 POU3F4P49335 361 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SNU13P55769 128 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 CLRN1P58418 232 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 MAMDC2Q7Z304 686 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GKN2Q86XP6 184 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FAM26EQ8N5C1 309 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 BBS1Q8NFJ9 593 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GPBAR1Q8TDU6 330 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DCUN1D4Q92564 292 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 URM1Q9BTM9 101 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GABARAPL1Q9H0R8 117 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 A4GALTQ9NPC4 353 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SIRT3Q9NTG7 399 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 KCNIP3Q9Y2W7 256 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SLC6A5Q9Y345 797 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 KDM4EB2RXH2 506 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 C4orf51C9J302 202 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FOSL2P15408 326 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 NFYAP23511 347 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 HTR1FP30939 366 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF41P51814 821 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 CDC20Q12834 499 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 AWAT2Q6E213 333 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 ARL14Q8N4G2 192 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 C12orf45Q8N5I9 185 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DVL3Q92997 716 aaPredicted RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 KCTD12Q96CX2 325 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DHRS1Q96LJ7 313 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 A0A0A6YYH2 397 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 A6NJ64 397 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 HSPA12AO43301 675 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TRAPPC6AO75865 159 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ERCC1P07992 297 aaPredicted RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 AKAIN1P0CW23 69 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 KIR2DL3P43628 341 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 LIM2P55344 173 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ASAH1Q13510 395 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 USF2Q15853 346 aaPredicted RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 CREB3L2Q70SY1 520 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 GPR155Q7Z3F1 870 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 MFSD4AQ8N468 514 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 RSC1A1Q92681 617 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TOMM40LQ969M1 308 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ORAI1Q96D31 301 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 HCAR1Q9BXC0 346 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PPA2Q9H2U2 334 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 RGCCQ9H4X1 137 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 INIPQ9NRY2 104 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 POLHQ9Y253 713 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 AHCTF1Q8WYP5 2266 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF850A8MQ14 1090 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 SYT7O43581 403 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 GCM2O75603 506 aaPredicted RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 HLA-AP01891 365 aaKnown RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 SYPP08247 313 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 MTNR1BP49286 362 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 OR10A3P58181 314 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 RAP2BP61225 183 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 YOD1Q5VVQ6 348 aaPredicted RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM64Q6YI46 380 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM99Q8N816 258 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF454Q8N9F8 522 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 OR13C5Q8NGS8 318 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 SFXN5Q8TD22 340 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 PAQR8Q8TEZ7 354 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 ZFPM2Q8WW38 1151 aa9.18□□□□□ -0.94
TRAF1-202ENST00000540010 DAZLQ92904 295 aaKnown RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 NECAB3Q96P71 396 aaPredicted RBP9.18□□□□□ -0.94
TRAF1-202ENST00000540010 INTS14Q96SY0 518 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms