RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PRAMEF26H0Y7S4 382 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 PDCD5O14737 125 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 TM4SF5O14894 197 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 MAGEB4O15481 346 aaPredicted RBP13.27□□□□□ -0.28
CDCA3-207ENST00000538862 OR7A10O76100 309 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 CSTAP01040 98 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 IGF2P01344 180 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ST6GAL1P15907 406 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 TYRP1P17643 537 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 GIFP27352 417 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 PPP1CAP62136 330 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 PRTGQ2VWP7 1150 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 MCATQ8IVS2 390 aaKnown RBP13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF440Q8IYI8 595 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ADAMTS18Q8TE60 1221 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 SMIM4Q8WVI0 70 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 PHF21AQ96BD5 680 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 MED30Q96HR3 178 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ZFP3Q96NJ6 502 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 OR14A2Q96R54 314 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 TTTY10Q9BZA0 68 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 MRPS7Q9Y2R9 242 aaKnown RBP13.27□□□□□ -0.28
CDCA3-207ENST00000538862 AK6Q9Y3D8 172 aaKnown RBP13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ADAM18Q9Y3Q7 739 aa13.27□□□□□ -0.28
CDCA3-207ENST00000538862 ERVH48-1M5A8F1 160 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 GLCEO94923 617 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 CT45A8P0DMV1 189 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 CT45A9P0DMV2 189 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 ANXA3P12429 323 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SPI1P17947 270 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SRMP19623 302 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 GPR3P46089 330 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 RPS4XP62701 263 aaKnown RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 GPLD1P80108 840 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 KLF9Q13886 244 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 CT45A2Q5DJT8 189 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 BTN2A1Q7KYR7 527 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 TAF8Q7Z7C8 310 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SYT9Q86SS6 491 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SFTPA2Q8IWL1 248 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 C19orf47Q8N9M1 422 aaKnown RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 OR11H7Q8NGC8 314 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF671Q8TAW3 534 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 NMNAT3Q96T66 252 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 TCEAL2Q9H3H9 227 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 DIABLOQ9NR28 239 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 COPS3Q9UNS2 423 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 DTX4Q9Y2E6 619 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 RNF215Q9Y6U7 377 aa13.27□□□□□ -0.29
CDCA3-207ENST00000538862 A0A0A6YYC8 382 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 MED19A0JLT2 244 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 OR6C68A6NDL8 312 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 TRABD2BA6NFA1 517 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 TGFBR3LH3BV60 316 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 I3L1I5 382 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 HRKO00198 91 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 CLDN4O14493 209 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 GNB5O14775 395 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 SELENOFO60613 162 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 WNT1P04628 370 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 SYPP08247 313 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 H2AFB2P0C5Z0 115 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 CCR5P51681 352 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 HHEXQ03014 270 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 FUT7Q11130 342 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF267Q14586 743 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.26□□□□□ -0.298e-6■■■■■ 36.9
CDCA3-207ENST00000538862 BCORP1Q8N888 145 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 ZNRF4Q8WWF5 429 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 TTC9Q92623 222 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 C3orf49Q96BT1 292 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 MRI1Q9BV20 369 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 UCKL1Q9NWZ5 548 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 EMC3Q9P0I2 261 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 AKAP7Q9P0M2 348 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-207ENST00000538862 LRIT1Q9P2V4 623 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 CLEC4AQ9UMR7 237 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF281Q9Y2X9 895 aa13.26□□□□□ -0.29
CDCA3-207ENST00000538862 A0A0B4J203 849 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 FAM25EA8MYX2 175 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 ITGA10O75578 1167 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 CTSBP07858 339 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 DEFB110Q30KQ9 67 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 FAM69AQ5T7M9 428 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 SLC6A19Q695T7 634 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 KCTD20Q7Z5Y7 419 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 ZNF761Q86XN6 746 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-207ENST00000538862 SLC35F3Q8IY50 421 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 OR56B4Q8NH76 319 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 LGALS14Q8TCE9 139 aa13.25□□□□□ -0.29
CDCA3-207ENST00000538862 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms