RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TRAV36DV7A0A075B6V5 113 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 MRASO14807 208 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 AIM2O14862 343 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 ATP8B1O43520 1251 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 LYPD3O95274 346 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 WNT11O96014 354 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 NPPAP01160 153 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 ZNF43P17038 809 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 PCSK6P29122 969 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 TTKP33981 857 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 FABP6P51161 128 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 CDH12P55289 794 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 PRPS1P60891 318 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 ROR2Q01974 943 aaKnown RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 SWT1Q5T5J6 900 aaKnown RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 AGAP6Q5VW22 663 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 LINC00114Q6XXX2 140 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 PATL1Q86TB9 770 aaKnown RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 RANBP3LQ86VV4 465 aaPredicted RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 TSPYL5Q86VY4 417 aaPredicted RBP13.08□□□□□ -0.32
RAB40B-202ENST00000538809 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 FBXL14Q8N1E6 418 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 OR6T1Q8NGN1 323 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 HTRA1Q92743 480 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 SLC41A3Q96GZ6 507 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 OXGR1Q96P68 337 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 DHRS9Q9BPW9 319 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 B3GALT5Q9Y2C3 310 aa13.08□□□□□ -0.32
RAB40B-202ENST00000538809 SONP18583 2426 aaKnown RBP13.07□□□□□ -0.32
RAB40B-202ENST00000538809 A0A096LPE4 126 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 A0A1W2PPZ6 126 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 SLC22A2O15244 555 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 OR2T1O43869 369 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 ZNF432O94892 652 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 BGLAPP02818 100 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 THY1P04216 161 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
RAB40B-202ENST00000538809 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 ETFDHQ16134 617 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 RBM45Q8IUH3 476 aaKnown RBP13.07□□□□□ -0.32
RAB40B-202ENST00000538809 MUC15Q8N387 334 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 ADPRHL1Q8NDY3 354 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 VANGL1Q8TAA9 524 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-202ENST00000538809 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 MOGAT1Q96PD6 335 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 MCHR1Q99705 422 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 TMEM43Q9BTV4 400 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 PCDHAC1Q9H158 963 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 NELFAQ9H3P2 528 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 FKRPQ9H9S5 495 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 USP22Q9UPT9 525 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 MOKQ9UQ07 419 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
RAB40B-202ENST00000538809 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 LOC100653049A0A140TA62 436 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 LOC102725191A0A1B0GVB3 256 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 TRAF3IP2O43734 574 aaPredicted RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 SSX4O60224 188 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 SLC43A1O75387 559 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 KRT34O76011 436 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 HPRP00739 348 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 NQO1P15559 274 aaKnown RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 INTS11Q5TA45 600 aaKnown RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 CARD17Q5XLA6 110 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 NHLRC1Q6VVB1 395 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 H1FNTQ75WM6 255 aaPredicted RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 BCL2L2Q92843 193 aaPredicted RBP13.06□□□□□ -0.32
RAB40B-202ENST00000538809 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 GRIP2Q9C0E4 1043 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 ARMCX1Q9P291 453 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 CAPN7Q9Y6W3 813 aa13.06□□□□□ -0.32
RAB40B-202ENST00000538809 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 INAFM1C9JVW0 142 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 MS4A18H0YCH9 400 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 CHP2O43745 196 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 SEC14L2O76054 403 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 NUDT6P53370 316 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
RAB40B-202ENST00000538809 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
RAB40B-202ENST00000538809 MS4A18Q3C1V0 323 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 MMEL1Q495T6 779 aa13.05□□□□□ -0.32
RAB40B-202ENST00000538809 ENTPD8Q5MY95 495 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms