RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PLA2G7Q13093 441 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 DOC2AQ14183 400 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 GPNMBQ14956 572 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 PGGHGQ32M88 737 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 TPGS1Q6ZTW0 290 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 SMIM5Q71RC9 77 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 APCDD1Q8J025 514 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 TMED6Q8WW62 240 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 F2RL3Q96RI0 385 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 TMEM106CQ9BVX2 250 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 PARP11Q9NR21 331 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 ADAM18Q9Y3Q7 739 aa11.43□□□□□ -0.58
USP3-203ENST00000538686 LNP1A1A4G5 178 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 CDHR4A6H8M9 788 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 IFITM5A6NNB3 132 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ADAP1O75689 374 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 MMP10P09238 476 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 MPIP34949 423 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SLC6A12P48065 614 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SLC6A9P48067 706 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TAS2R20P59543 309 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 JOSD1Q15040 202 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 TGIF1Q15583 401 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 HAGHQ16775 308 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 RIPPLY2Q5TAB7 128 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 OR2A2Q6IF42 318 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 GRHL2Q6ISB3 625 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 LANCL3Q6ZV70 420 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 REPS2Q8NFH8 660 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SYNPRQ8TBG9 265 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 GPA33Q99795 319 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ACTRT3Q9BYD9 372 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 DBNDD1Q9H9R9 158 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 NCDNQ9UBB6 729 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 PRODH2Q9UF12 536 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 CKAP5Q14008 2032 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TVP23AA6NH52 213 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 RTCAO00442 366 aaKnown RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 ZNF208O43345 1280 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TGOLN2O43493 480 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 NARSO43776 548 aaKnown RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 RAMP2O60895 175 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SLC25A14O95258 325 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 PRAMEF12O95522 483 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 PLGP00747 810 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 GABRR1P24046 479 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TIA1P31483 386 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP3-203ENST00000538686 NSG1P42857 185 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SCAND1P57086 179 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 PCBP4P57723 403 aaKnown RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 YBEYP58557 167 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 SYPL1Q16563 259 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ISXQ2M1V0 245 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 PLBD1Q6P4A8 553 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 LCTLQ6UWM7 567 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 RNASEH2CQ8TDP1 164 aaKnown RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SMPDL3BQ92485 455 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 GHSRQ92847 366 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 YPEL4Q96NS1 127 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 CAMK1GQ96NX5 476 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TIMP4Q99727 224 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 POTEKPQ9BYX7 375 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 ACTR3CQ9C0K3 210 aaPredicted RBP11.42□□□□□ -0.58
USP3-203ENST00000538686 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 SMOC1Q9H4F8 434 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TRPV4Q9HBA0 871 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 CSNK1G1Q9HCP0 422 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
USP3-203ENST00000538686 TRBV6-7A0A0A0MS04 114 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 TRDCB7Z8K6 153 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 PRAMEF11O60813 436 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 CTNSO60931 367 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ABLIM3O94929 683 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 BCHEP06276 602 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 AOAHP28039 575 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ADH6P28332 368 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 PPP2R1BP30154 601 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 IL2RGP31785 369 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 SOAT1P35610 550 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 GJA5P36382 358 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ADH7P40394 386 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ZNF84P51523 738 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 TDGF1P3P51864 188 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 TAS2R19P59542 299 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 LILRA4P59901 499 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ACTC1P68032 377 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ACTA1P68133 377 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 RAE1P78406 368 aaKnown RBP11.41□□□□□ -0.58
USP3-203ENST00000538686 CHIT1Q13231 466 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms