RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SDHAP31040 664 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CASP3P42574 277 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 C17orf67Q0P5P2 114 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TMEM44Q2T9K0 475 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TBC1D25Q3MII6 688 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 MDGA2Q7Z553 956 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 OR52N1Q8NH53 320 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 HSD17B8Q92506 261 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 JSRP1Q96MG2 331 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ABCB10Q9NRK6 738 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1B0GTH9 108 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TBX1O43435 398 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 NPIPB7O75200 414 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 GP1BAP07359 652 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 SHC1P29353 583 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 GABRA5P31644 462 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CENPAP49450 140 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 EFR3AQ14156 821 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ISXQ2M1V0 245 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 SLC35F2Q8IXU6 374 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 GNRHR2Q96P88 292 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 PDCD1LG2Q9BQ51 273 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 WDR54Q9H977 334 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CCL3P10147 92 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 AZGP1P25311 298 aaKnown RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 Q0VFX4 171 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ACKR1Q16570 336 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 FAM69AQ5T7M9 428 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TMPRSS11AQ6ZMR5 421 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ARIH2OSQ8N7S6 290 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 DTX3Q8N9I9 347 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 WDSUB1Q8N9V3 476 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 CNN2Q99439 309 aaKnown RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 NMNAT2Q9BZQ4 307 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 MMP27Q9H306 513 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 A8MVM7 634 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 CBFA2T3O75081 653 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 RPP14O95059 124 aaKnown RBP12.74□□□□□ -0.37
ACTN1-205ENST00000538545 AKR7A3O95154 331 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 SFTPDP35247 375 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 FOLR3P41439 243 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 MEP1BQ16820 701 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 VASH1Q7L8A9 365 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-205ENST00000538545 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 HTRA1Q92743 480 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 GPX7Q96SL4 187 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-205ENST00000538545 EMC6Q9BV81 110 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 FKRPQ9H9S5 495 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 MED29Q9NX70 200 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 PADI1Q9ULC6 663 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 CHCHD2Q9Y6H1 151 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-205ENST00000538545 CASKO14936 926 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 SNX4O95219 450 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 SOX6P35712 828 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 DIO1P49895 249 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 ODF4Q2M2E3 257 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 LRRC69Q6ZNQ3 347 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 POC1BQ8TC44 478 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 C14orf119Q9NWQ9 140 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF229Q9UJW7 825 aa12.74□□□□□ -0.37
ACTN1-205ENST00000538545 LOC102723996A0A087X1L8 192 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 ANKUB1A6NFN9 424 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 MPZL1O95297 269 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 FBXO45P0C2W1 286 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 FMODQ06828 376 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 BPHLQ86WA6 291 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 NEIL3Q8TAT5 605 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 LIPHQ8WWY8 451 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 TXNDC15Q96J42 360 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 AMELYQ99218 206 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 CCDC59Q9P031 241 aaKnown RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 PLEKHB1Q9UF11 243 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 TCFL5Q9UL49 500 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 NCKAP5O14513 1909 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 CEP250Q9BV73 2442 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 DKK1O94907 266 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 AHSA1O95433 338 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 IMPDH2P12268 514 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 NTRK2Q16620 822 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms