RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CECR9P0C854 216 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ARAFP10398 606 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 THBS2P35442 1172 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ARR3P36575 388 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 SERPINF1P36955 418 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 NR4A2P43354 598 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 CLDN17P56750 224 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
DDB1-212ENST00000538470 C1DQ13901 141 aaKnown RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 ADIPOQQ15848 244 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 MST1LQ2TV78 715 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ALG10BQ5I7T1 473 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 SWT1Q5T5J6 900 aaKnown RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 REEP3Q6NUK4 255 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 SLC2A7Q6PXP3 512 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 LINGO2Q7L985 606 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 NET1Q7Z628 596 aaPredicted RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 GPR137CQ8N3F9 429 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ZNF540Q8NDQ6 660 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 NFKBIDQ8NI38 313 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 HTRA1Q92743 480 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 SLC25A36Q96CQ1 311 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 KCNK17Q96T54 332 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 EPYCQ99645 322 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 PLK3Q9H4B4 646 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 TMEM38AQ9H6F2 299 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 TCF7L2Q9NQB0 619 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 SELENONQ9NZV5 590 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 KLHL14Q9P2G3 628 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 B3GAT1Q9P2W7 334 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 KCNS2Q9ULS6 477 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 CORINQ9Y5Q5 1042 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 IGKV1D-42A0A075B6H8 117 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 LOC390937A0A1W2PQ73 354 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 VSTM5A8MXK1 200 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 ZNF99A8MXY4 864 aaPredicted RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 NR5A2O00482 541 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TRAF3IP2O43734 574 aaPredicted RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 LMX1BO60663 402 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 OR4A8P0C604 315 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 CBR1P16152 277 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 HNF1AP20823 631 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 HTR2AP28223 471 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 ATP4BP51164 291 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TUBA1BP68363 451 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TUBA4AP68366 448 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 CDK6Q00534 326 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 POU3F1Q03052 451 aaPredicted RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 LGALS3BPQ08380 585 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 GGTLC2Q14390 218 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 FAM166AQ6J272 317 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 ULK3Q6PHR2 472 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TUBA1AQ71U36 451 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 H1FNTQ75WM6 255 aaPredicted RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 RANBP3LQ86VV4 465 aaPredicted RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 SNX32Q86XE0 403 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 MSRB3Q8IXL7 192 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TMEM123Q8N131 208 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 SCAIQ8N9R8 606 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 IL17RDQ8NFM7 739 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 CKAP2Q8WWK9 683 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 STON2Q8WXE9 905 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 MAL2Q969L2 176 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 TAAR8Q969N4 342 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 SPDL1Q96EA4 605 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 SLC47A1Q96FL8 570 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 THOC1Q96FV9 657 aaKnown RBP7.51□□□□□ -1.21
DDB1-212ENST00000538470 SLC41A3Q96GZ6 507 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 LRR1Q96L50 414 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 ANKRD27Q96NW4 1050 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 OR2M2Q96R28 347 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 ZNF607Q96SK3 696 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 CCDC28BQ9BUN5 200 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 BEX2Q9BXY8 128 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 SHARPINQ9H0F6 387 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 RAB1BQ9H0U4 201 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 GPR35Q9HC97 309 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 B3GAT2Q9NPZ5 323 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 SLC25A37Q9NYZ2 338 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 USP22Q9UPT9 525 aa7.51□□□□□ -1.21
DDB1-212ENST00000538470 A0A087WUJ7 227 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 A0A096LPE4 126 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 TRBV5-3A0A0A0MS03 114 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 IGHV2OR16-5A0A0B4J2B6 119 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 A0A0B4J2E0 115 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 A0A1B0GX12 115 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 A0A1W2PPZ6 126 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 EVPLLA8MZ36 301 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 hCG_2039718K7EN88 272 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 PHF1O43189 567 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 SERPINB7O75635 380 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 LY6HO94772 140 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 C8BP07358 591 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 VIMP08670 466 aaKnown RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 APEHP13798 732 aaKnown RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 NQO1P15559 274 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms