RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 C10orf105Q8TEF2 133 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 MDFIQ99750 246 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 TMEM38AQ9H6F2 299 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 TMEM27Q9HBJ8 222 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 CA10Q9NS85 328 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 SLC25A37Q9NYZ2 338 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 CRNNQ9UBG3 495 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 A0A096LNT2 108 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 B9A039 149 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 M0R082 166 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 UPK3AO75631 287 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 ZNF432O94892 652 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
RTN3-207ENST00000536011 AQP5P55064 265 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 NAAAQ02083 359 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 LGALS3BPQ08380 585 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 SCARB2Q14108 478 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 SQLEQ14534 574 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 UEVLDQ8IX04 471 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 SCAIQ8N9R8 606 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 IL17RDQ8NFM7 739 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 RNF217Q8TC41 542 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 HTRA1Q92743 480 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
RTN3-207ENST00000536011 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 LPAR3Q9UBY5 353 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 ANGPT4Q9Y264 503 aa11.43□□□□□ -0.58
RTN3-207ENST00000536011 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
RTN3-207ENST00000536011 A0A096LPE4 126 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 IGLV1-44P01699 117 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 CECR9P0C854 216 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 CBR1P16152 277 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 GRPRP30550 384 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ARR3P36575 388 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 GZMKP49863 264 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ARF1P84077 181 aaKnown RBP11.42□□□□□ -0.58
RTN3-207ENST00000536011 EFNB3Q15768 340 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 AGKQ53H12 422 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 LINGO2Q7L985 606 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 KDM8Q8N371 416 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 HIPK4Q8NE63 616 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 STON2Q8WXE9 905 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ANKRD27Q96NW4 1050 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
RTN3-207ENST00000536011 EBF4Q9BQW3 602 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 CRLF2Q9HC73 371 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 SLCO1B3Q9NPD5 702 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 NOX1Q9Y5S8 564 aa11.42□□□□□ -0.58
RTN3-207ENST00000536011 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 A0A087WUJ7 227 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 ZNF99A8MXY4 864 aaPredicted RBP11.41□□□□□ -0.58
RTN3-207ENST00000536011 GPRIN2O60269 458 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 OR4A8P0C604 315 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 GPX2P18283 190 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 HTR2AP28223 471 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 CAPZA2P47755 286 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 PPOXP50336 477 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 CYP51A1Q16850 503 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 CEACAM16Q2WEN9 425 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 PAGE3Q5JUK9 113 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 TMEM123Q8N131 208 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 C11orf65Q8NCR3 313 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
RTN3-207ENST00000536011 LRR1Q96L50 414 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 OR2M2Q96R28 347 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 TMEM43Q9BTV4 400 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 BEX2Q9BXY8 128 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms