RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ASB9Q96DX5 294 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 MOGAT1Q96PD6 335 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 ALKBH3Q96Q83 286 aaPredicted RBP14.39□□□□□ -0.11
ATL3-202ENST00000535789 ZNF587Q96SQ5 575 aaPredicted RBP14.39□□□□□ -0.11
ATL3-202ENST00000535789 CCL19Q99731 98 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 PIP5K1AQ99755 562 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 PCDHAC1Q9H158 963 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 NELFAQ9H3P2 528 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 POMPQ9Y244 141 aa14.39□□□□□ -0.11
ATL3-202ENST00000535789 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
ATL3-202ENST00000535789 TRAV36DV7A0A075B6V5 113 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 SHISA9B4DS77 424 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 TRAF3IP2O43734 574 aaPredicted RBP14.38□□□□□ -0.11
ATL3-202ENST00000535789 ZNF432O94892 652 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 TNFRSF1BP20333 461 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 GRPRP30550 384 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 FAM69AQ5T7M9 428 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 ADAM5Q6NVV9 412 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 ERICH5Q6P6B1 374 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 AAED1Q7RTV5 226 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 PATL1Q86TB9 770 aaKnown RBP14.38□□□□□ -0.11
ATL3-202ENST00000535789 BHLHE22Q8NFJ8 381 aaPredicted RBP14.38□□□□□ -0.11
ATL3-202ENST00000535789 VANGL1Q8TAA9 524 aaPredicted RBP14.38□□□□□ -0.11
ATL3-202ENST00000535789 SLC41A3Q96GZ6 507 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 MUS81Q96NY9 551 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 MCHR1Q99705 422 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 SLCO5A1Q9H2Y9 848 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 MUC13Q9H3R2 512 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 RNF115Q9Y4L5 304 aa14.38□□□□□ -0.11
ATL3-202ENST00000535789 CPSF4LA6NMK7 179 aaKnown RBP14.37□□□□□ -0.11
ATL3-202ENST00000535789 ARPC2O15144 300 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 CLOCKO15516 846 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 FMO6PO60774 539 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 UPK3AO75631 287 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 C8BP07358 591 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 DANCRP0C864 163 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 ATP6V1B2P21281 511 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 TRAP1Q12931 704 aaKnown RBP14.37□□□□□ -0.11
ATL3-202ENST00000535789 ENTPD8Q5MY95 495 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 NHLRC1Q6VVB1 395 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 RANBP3LQ86VV4 465 aaPredicted RBP14.37□□□□□ -0.11
ATL3-202ENST00000535789 ZNF611Q8N823 705 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 SLC47A1Q96FL8 570 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 EDARQ9UNE0 448 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 RASD1Q9Y272 281 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 SNX13Q9Y5W8 968 aa14.37□□□□□ -0.11
ATL3-202ENST00000535789 MS4A18H0YCH9 400 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 CHP2O43745 196 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 CIB2O75838 187 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 VAMP5O95183 116 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 CD3EP07766 207 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 SOD3P08294 240 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 NCK1P16333 377 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 FUT4P22083 530 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 VEZF1Q14119 521 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 MS4A18Q3C1V0 323 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ZNF672Q499Z4 452 aaPredicted RBP14.36□□□□□ -0.11
ATL3-202ENST00000535789 Q5PR19 223 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 TMEM225Q6GV28 225 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 LCN8Q6JVE9 175 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 NIPAL3Q6P499 406 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ZNF613Q6PF04 617 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 B3GLCTQ6Y288 498 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 SLC30A8Q8IWU4 369 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ADAMTS16Q8TE57 1224 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 PERPQ96FX8 193 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 PRSS27Q9BQR3 290 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 TMEM43Q9BTV4 400 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ZNF426Q9BUY5 554 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ESRP2Q9H6T0 727 aaKnown RBP14.36□□□□□ -0.11
ATL3-202ENST00000535789 TMEM27Q9HBJ8 222 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 SLC17A5Q9NRA2 495 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 PARPBPQ9NWS1 579 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ACTR3BQ9P1U1 418 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 MAGEL2Q9UJ55 1249 aa14.36□□□□□ -0.11
ATL3-202ENST00000535789 ANK3Q12955 4377 aaKnown RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 CIB4A0PJX0 185 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 CXCR6O00574 342 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 ABCD4O14678 606 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 CD99P14209 185 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 MPGP29372 298 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 PTH2RP49190 550 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 ZNF83P51522 516 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 CLDN17P56750 224 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 NKX6-1P78426 367 aaPredicted RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 FLOT2Q14254 428 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 PGGHGQ32M88 737 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 HIKESHIQ53FT3 197 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 PHYHD1Q5SRE7 291 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 SWT1Q5T5J6 900 aaKnown RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 C1orf146Q5VVC0 180 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 C5orf46Q6UWT4 87 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 P2RY8Q86VZ1 359 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 TMEM123Q8N131 208 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 LRRC75A-AS1Q8N1F1 130 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 ADPRHL1Q8NDY3 354 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 C1orf162Q8NEQ5 155 aaPredicted RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 OR6S1Q8NH40 331 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms