RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TMEM33P57088 247 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ROR2Q01974 943 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 STX3Q13277 289 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 FXNQ16595 210 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 REP15Q6BDI9 236 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 NIPAL3Q6P499 406 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 USP43Q70EL4 1123 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 H1FNTQ75WM6 255 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 VRK2Q86Y07 508 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ANKS4BQ8N8V4 417 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 PIK3C3Q8NEB9 887 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC38A4Q969I6 547 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ALKBH3Q96Q83 286 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 OR2M2Q96R28 347 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ZBTB18Q99592 522 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 RSPO3Q9BXY4 272 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 MS4A5Q9H3V2 200 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 ADPRHL2Q9NX46 363 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEFF2Q9UIK5 374 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 USP22Q9UPT9 525 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
CLSTN3-206ENST00000535668 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF503-AS2A6NEH8 195 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 hCG_2039718K7EN88 272 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 NR5A2O00482 541 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 AIM2O14862 343 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 SYNGR3O43761 229 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 AKAP8O43823 692 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 MGRN1O60291 552 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC22A3O75751 556 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 KRT33AO76009 404 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 GSNP06396 782 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 ETFAP13804 333 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 H2AFXP16104 143 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 DSTNP60981 165 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 ARF1P84077 181 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 LGALS3BPQ08380 585 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 BNIP2Q12982 314 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 RGNQ15493 299 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 NRN1LQ496H8 165 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 LRIF1Q5T3J3 769 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 DHRS4L2Q6PKH6 230 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 HMGN2P46Q86SG4 172 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 SERPINA11Q86U17 422 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 MYPOPQ86VE0 399 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 C20orf196Q8IYI0 205 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 UBASH3BQ8TF42 649 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 GTF2H4Q92759 462 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 MRPL24Q96A35 216 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 KTI12Q96EK9 354 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEM19Q96HH6 336 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 ITCHQ96J02 903 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 VRK1Q99986 396 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 RAD21L1Q9H4I0 556 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF385DQ9H6B1 395 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 RMND5AQ9H871 391 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 CHODLQ9H9P2 273 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 NOX3Q9HBY0 568 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 PNPOQ9NVS9 261 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 SPEF1Q9Y4P9 236 aa9.67□□□□□ -0.86
CLSTN3-206ENST00000535668 TRAV36DV7A0A075B6V5 113 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 A0A087WUJ7 227 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 MS4A18H0YCH9 400 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 RGS16O15492 202 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 ACHEP22303 614 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 EPHA3P29320 983 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 ARFIP2P53365 341 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 SCGB2A2Q13296 93 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 MS4A18Q3C1V0 323 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 IQCCQ4KMZ1 466 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 LINC00114Q6XXX2 140 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 PXKQ7Z7A4 578 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 SNX32Q86XE0 403 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 BHLHE22Q8NFJ8 381 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 SEMA6DQ8NFY4 1073 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 BBS10Q8TAM1 723 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 CKAP2Q8WWK9 683 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 TAAR8Q969N4 342 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 VPS33AQ96AX1 596 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF837Q96EG3 531 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 DNAJA3Q96EY1 480 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEM43Q9BTV4 400 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 SEC61A2Q9H9S3 476 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 NKIRAS2Q9NYR9 191 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF224Q9NZL3 707 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 KLHL14Q9P2G3 628 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 CMAHPQ9Y471 501 aa9.66□□□□□ -0.86
CLSTN3-206ENST00000535668 A0A096LPE4 126 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEM247A6NEH6 219 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 FMO6PO60774 539 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 TFP02787 698 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 BCHEP06276 602 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 CELA3BP08861 270 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms