RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RAI1Q7Z5J4 1906 aaPredicted RBP7.6□□□□□ -1.19
SFSWAP-202ENST00000535202 CCDC154A6NI56 674 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 TRPC5OSA6NMA1 111 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ETV2O00321 342 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DLGAP1O14490 977 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 AIM2O14862 343 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 HDAC3O15379 428 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 BCAS1O75363 584 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 GABARAPO95166 117 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 C1QCP02747 245 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 GPIP06744 558 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 YES1P07947 543 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 TFPIP10646 304 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 NAT2P11245 290 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 TCN1P20061 433 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 FPR1P21462 350 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 HOXC12P31275 282 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 RYKP34925 604 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 CDKN2CP42773 168 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 RAD23AP54725 363 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DEFA1P59665 94 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DEFA3P59666 94 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 RAC3P60763 192 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ADARB1P78563 741 aaKnown RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 EPS8Q12929 822 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 BNIP2Q12982 314 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 BAMBIQ13145 260 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 TSC22D1Q15714 1073 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 MTX3Q5HYI7 312 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 Q5PR19 223 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SHEQ5VZ18 495 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF704Q6ZNC4 412 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 C20orf204Q6ZNR8 217 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF621Q6ZSS3 439 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 PLEKHM3Q6ZWE6 761 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SPATA19Q7Z5L4 167 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 KRTAP1-3Q8IUG1 177 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 P3H2Q8IVL5 708 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SLC38A6Q8IZM9 456 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SLC43A2Q8N370 569 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 STEAP2Q8NFT2 490 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 LRTOMTQ8WZ04 291 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 PIGTQ969N2 578 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SLCO4A1Q96BD0 722 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 S100PBPQ96BU1 408 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DNAJA3Q96EY1 480 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 CCDC115Q96NT0 180 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 OR52E6Q96RD3 313 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 PIP5K1AQ99755 562 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SLC29A1Q99808 456 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 CIB1Q99828 191 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 INPP5KQ9BT40 448 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 KCNN2Q9H2S1 579 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 GSX1Q9H4S2 264 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DLL4Q9NR61 685 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SERINC1Q9NRX5 453 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ACER3Q9NUN7 267 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SMPD3Q9NY59 655 aaPredicted RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 KLHL9Q9P2J3 617 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 CD300AQ9UGN4 299 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF229Q9UJW7 825 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 SLC35A3Q9Y2D2 325 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 NOSIPQ9Y314 301 aaKnown RBP7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 DSCAMO60469 2012 aa7.59□□□□□ -1.19
SFSWAP-202ENST00000535202 LOC100653049A0A140TA62 436 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PRAMEF27A3QJZ7 478 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CLDN24A6NM45 220 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CENPXA8MT69 81 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 HMGN4O00479 90 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SMAD9O15198 467 aaKnown RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ARHGEF9O43307 516 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 KLF4O43474 513 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GCM2O75603 506 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CCNKO75909 580 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 KRT34O76011 436 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 HPRP00739 348 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PLAUP00749 431 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ADAP00813 363 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PGRP06401 933 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CHRM4P08173 479 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GUSBP08236 651 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 UMPSP11172 480 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PSMB1P20618 241 aaKnown RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 FASP25445 335 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 OR3A3P47888 321 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 DIO1P49895 249 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ANXA11P50995 505 aaKnown RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PSME3P61289 254 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 COPZ1P61923 177 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CSNK2A1P68400 391 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 KCNJ10P78508 379 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GALK2Q01415 458 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 IFITM3Q01628 133 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF45Q02386 682 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 RASGEF1BQ0VAM2 473 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SYPL1Q16563 259 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SYT14P1Q58G82 188 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms