RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 THUMPD1Q9NXG2 353 aaKnown RBP11.99□□□□□ -0.49
CCDC84-208ENST00000534656 B3GAT1Q9P2W7 334 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 SEC14L4Q9UDX3 406 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 CMAHPQ9Y471 501 aa11.99□□□□□ -0.49
CCDC84-208ENST00000534656 LYNX1G3V0Z9 82 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 RGS16O15492 202 aaPredicted RBP11.98□□□□□ -0.49
CCDC84-208ENST00000534656 IL6P05231 212 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 LYNX1P0DP58 116 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 PCMT1P22061 227 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 EPHA3P29320 983 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 CAPZA2P47755 286 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 EVX1P49640 407 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 HOXC5Q00444 222 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 BST1Q10588 318 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
CCDC84-208ENST00000534656 C1DQ13901 141 aaKnown RBP11.98□□□□□ -0.49
CCDC84-208ENST00000534656 CCNIQ14094 377 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 KRT71Q3SY84 523 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF311Q5JNZ3 666 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 KRT80Q6KB66 452 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 PIK3C3Q8NEB9 887 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 TAAR8Q969N4 342 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 SLC35B4Q969S0 331 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 OR2M2Q96R28 347 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 TPK1Q9H3S4 243 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 WDR55Q9H6Y2 383 aaPredicted RBP11.98□□□□□ -0.49
CCDC84-208ENST00000534656 TPT1P8Q9HAU6 139 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 B3GNT2Q9NY97 397 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 USP22Q9UPT9 525 aa11.98□□□□□ -0.49
CCDC84-208ENST00000534656 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 TMEM247A6NEH6 219 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF99A8MXY4 864 aaPredicted RBP11.97□□□□□ -0.49
CCDC84-208ENST00000534656 B4DSR2 109 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 M0R082 166 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 AIM2O14862 343 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 SYNGR3O43761 229 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 OR2T1O43869 369 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 SLC22A3O75751 556 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 ANP32DO95626 131 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 NR4A1P22736 598 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 IL1RL1Q01638 556 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 RUNX1T1Q06455 604 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 MPP2Q14168 576 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 FAM69AQ5T7M9 428 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 C5orf46Q6UWT4 87 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 C6orf89Q6UWU4 347 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 DEF8Q6ZN54 512 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 RINLQ6ZS11 566 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 TMEM123Q8N131 208 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.97□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF417Q8TAU3 575 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 MRPL24Q96A35 216 aaKnown RBP11.97□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF587Q96SQ5 575 aaPredicted RBP11.97□□□□□ -0.49
CCDC84-208ENST00000534656 MRPL37Q9BZE1 423 aaKnown RBP11.97□□□□□ -0.49
CCDC84-208ENST00000534656 C12orf10Q9HB07 376 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 RPS6KB2Q9UBS0 482 aa11.97□□□□□ -0.49
CCDC84-208ENST00000534656 A0A0A6YYJ9 748 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 TRPC5OSA6NMA1 111 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 SLCO1B7G3V0H7 640 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 HDAC3O15379 428 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 TRAF3IP2O43734 574 aaPredicted RBP11.96□□□□□ -0.49
CCDC84-208ENST00000534656 AKAP8O43823 692 aaKnown RBP11.96□□□□□ -0.49
CCDC84-208ENST00000534656 SEC14L2O76054 403 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 VENTXO95231 258 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 IDO1P14902 403 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 CFPP27918 469 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 GRPRP30550 384 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 MSMPQ1L6U9 139 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 GTDC1Q4AE62 458 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 SLC9B1Q4ZJI4 515 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 PDCD4Q53EL6 469 aaKnown RBP11.96□□□□□ -0.49
CCDC84-208ENST00000534656 ELFN2Q5R3F8 820 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 PHYHD1Q5SRE7 291 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 H1FNTQ75WM6 255 aaPredicted RBP11.96□□□□□ -0.49
CCDC84-208ENST00000534656 NET1Q7Z628 596 aaPredicted RBP11.96□□□□□ -0.49
CCDC84-208ENST00000534656 GLCCI1Q86VQ1 547 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 SLC38A4Q969I6 547 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 ITCHQ96J02 903 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 ZNF75AQ96N20 296 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 RMND5AQ9H871 391 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 BCL2L10Q9HD36 194 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 KCNK9Q9NPC2 374 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.49
CCDC84-208ENST00000534656 MS4A18H0YCH9 400 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 M0R233 179 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 M0R3G1 203 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 HLA-HP01893 362 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 CD79AP11912 226 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF35P13682 527 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
CCDC84-208ENST00000534656 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 MS4A18Q3C1V0 323 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 NXNQ6DKJ4 435 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 MSANTD1Q6ZTZ1 278 aa11.95□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms