RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CCDC190Q86UF4 302 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 EXD3Q8N9H8 876 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 NEIL3Q8TAT5 605 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 SNX33Q8WV41 574 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 KLHDC3Q9BQ90 382 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 TMED9Q9BVK6 235 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 TXNIPQ9H3M7 391 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
BEST1-208ENST00000534553 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
BEST1-208ENST00000534553 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 FTCDNL1E5RQL4 147 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 CASKO14936 926 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 FZD7O75084 574 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 SULT1C4O75897 302 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 JMJD7P0C870 316 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 GRPRP30550 384 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 CASP3P42574 277 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 MTNR1BP49286 362 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 MESTQ5EB52 335 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 TMEM164Q5U3C3 297 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 EXPH5Q8NEV8 1989 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 OR10G3Q8NGC4 313 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 TBCCD1Q9NVR7 557 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 ZMIZ1Q9ULJ6 1067 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 FKBP7Q9Y680 259 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 A0A087WZY1 265 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 J3QLW9 94 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 PLPP3O14495 311 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 CDX4O14627 284 aaPredicted RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 CBFA2T3O75081 653 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 DLGAP3O95886 979 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 TFP02787 698 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 TACSTD2P09758 323 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 ZNF19P17023 458 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 SDC2P34741 201 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 PTGDSP41222 190 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 SSR4P51571 173 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 PLPPR5Q32ZL2 321 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 EEF1A1P5Q5VTE0 462 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 DMKNQ6E0U4 476 aaPredicted RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 VASNQ6EMK4 673 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 RPL22L1Q6P5R6 122 aaKnown RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 Q6ZNX1 250 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 PLEKHG7Q6ZR37 379 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 ZFP41Q8N8Y5 198 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 ASB15Q8WXK1 588 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 ZBTB8AQ96BR9 441 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 NXPE2Q96DL1 559 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 SLC30A2Q9BRI3 323 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 CCDC32Q9BV29 185 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 BARHL1Q9BZE3 327 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 FANCFQ9NPI8 374 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 TMEM9BQ9NQ34 198 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 MED11Q9P086 117 aa12.11□□□□□ -0.47
BEST1-208ENST00000534553 ZNF346Q9UL40 294 aaKnown RBP12.11□□□□□ -0.47
BEST1-208ENST00000534553 NCOR1O75376 2440 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 A0A1B0GVG6 124 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 A6NIZ1 184 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 OGG1O15527 345 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 GPRIN2O60269 458 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 SERPINI2O75830 405 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 PYCR1P32322 319 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 TGM4P49221 684 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 OR12D2P58182 307 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 RAP1BP61224 184 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 RAP1AP62834 184 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 INSM1Q01101 510 aaPredicted RBP12.1□□□□□ -0.47
BEST1-208ENST00000534553 PUDPQ08623 228 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 HNRNPA0Q13151 305 aaKnown RBP12.1□□□□□ -0.47
BEST1-208ENST00000534553 SSPNQ14714 243 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 FAM220AQ7Z4H9 259 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 TPRA1Q86W33 373 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 ACOT12Q8WYK0 555 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 PHYHIPQ92561 330 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 HDHD5Q9BXW7 423 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 ALKBH4Q9NXW9 302 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
BEST1-208ENST00000534553 TCFL5Q9UL49 500 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
BEST1-208ENST00000534553 CMAHPQ9Y471 501 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms