RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 CCDC92Q53HC0 331 aaPredicted RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 EOGTQ5NDL2 527 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 WASH2PQ6VEQ5 465 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 SYVN1Q86TM6 617 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ZSCAN30Q86W11 494 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 CEND1Q8N111 149 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 OR5B17Q8NGF7 314 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ERMNQ8TAM6 284 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ZNF564Q8TBZ8 553 aaPredicted RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 GIPC3Q8TF64 312 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 MYLPFQ96A32 169 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 SLC25A38Q96DW6 304 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 VSTM2LQ96N03 204 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 MRPL45Q9BRJ2 306 aaKnown RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 TRIM4Q9C037 500 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 SLC25A51Q9H1U9 297 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ZNF702PQ9H963 129 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ABCB10Q9NRK6 738 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 PNO1Q9NRX1 252 aaKnown RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 ATXN10Q9UBB4 475 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 GALPQ9UBC7 116 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 ATP6V1HQ9UI12 483 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 GMPPBQ9Y5P6 360 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 TEP1Q99973 2627 aaKnown RBP4.51□□□□□ -1.69
CASP4-213ENST00000534356 A0A0U1RQV5 110 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 SAGE2PA6NJ88 616 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 E9PLD3 99 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 F8VP50 259 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 J3QKU1 62 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 LYPD3O95274 346 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 CCDC166P0CW27 439 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 UQCRBP14927 111 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ZP3P21754 424 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 SLC7A9P82251 487 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ZNF154Q13106 437 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 DPYSQ14117 519 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 TEX44Q53QW1 395 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 FAM120AOSQ5T036 256 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ZNF544Q6NX49 715 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 TPGS1Q6ZTW0 290 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ERASQ7Z444 233 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 HSD11B1LQ7Z5J1 315 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 CADM2Q8N3J6 435 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 CSGALNACT2Q8N6G5 542 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 TMEM80Q96HE8 168 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ZIM3Q96PE6 472 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 ACBD6Q9BR61 282 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 PLSCR3Q9NRY6 295 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 TMEM9Q9P0T7 183 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 MGAT4BQ9UQ53 548 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 CACNA1DQ01668 2161 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 TEX15Q9BXT5 2789 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 FLNCQ14315 2725 aa4.51□□□□□ -1.69
CASP4-213ENST00000534356 NBPF19A0A087WUL8 3843 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 BOD1L1Q8NFC6 3051 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 RELNP78509 3460 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 BICDL2A1A5D9 508 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 HDAC3O15379 428 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 VPS26AO75436 327 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 ZNF254O75437 659 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 SCRG1O75711 98 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 SERF1AO75920 110 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 HLA-EP13747 358 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 PAICSP22234 425 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 RDXP35241 583 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 TPMTP51580 245 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 LIM2P55344 173 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 RPL10AP62906 217 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 RPL32P62910 135 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 OVGP1Q12889 678 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 PRR4Q16378 134 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 TMEM215Q68D42 235 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 IFNEQ86WN2 208 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 MISPQ8IVT2 679 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 PRR22Q8IZ63 422 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 C2orf15Q8WU43 125 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 PHYHIPLQ96FC7 376 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 DHTKD1Q96HY7 919 aaPredicted RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 C8orf76Q96K31 380 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 GABRG3Q99928 467 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 TBCDQ9BTW9 1192 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 CCSER1Q9C0I3 900 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 DEC1Q9P2X7 70 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 ABCG2Q9UNQ0 655 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 SPTAN1Q13813 2472 aaKnown RBP4.5□□□□□ -1.69
CASP4-213ENST00000534356 RP1P56715 2156 aa4.5□□□□□ -1.69
CASP4-213ENST00000534356 NOTCH2Q04721 2471 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 OR7A17O14581 309 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 HUS1O60921 280 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 CD55P08174 381 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 ANXA3P12429 323 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 PTGFRP43088 359 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 MTTPP55157 894 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 RPL8P62917 257 aaKnown RBP4.49□□□□□ -1.69
CASP4-213ENST00000534356 GTF2BQ00403 316 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 HSF2Q03933 536 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 SRSF6Q13247 344 aaKnown RBP4.49□□□□□ -1.69
CASP4-213ENST00000534356 CFAP221Q4G0U5 840 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 DCST2Q5T1A1 773 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms