RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 M0R3H8 397 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 IGHV4-39P01824 125 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 HEXAP06865 529 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 HLA-DOBP13765 273 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 AQP1P29972 269 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 TTKP33981 857 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 ARFIP2P53365 341 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 SH3BGRP55822 239 aaPredicted RBP9.44□□□□□ -0.9
SDHD-208ENST00000534010 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 TGFBR3Q03167 851 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 ZP4Q12836 540 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 NFYCQ13952 458 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 TBRG1Q3YBR2 411 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 REP15Q6BDI9 236 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 P3H2Q8IVL5 708 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 UBE2J2Q8N2K1 259 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 KDM8Q8N371 416 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 OR52N5Q8NH56 324 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 LIPHQ8WWY8 451 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
SDHD-208ENST00000534010 PERPQ96FX8 193 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 SEPHS2Q99611 448 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 DHRS9Q9BPW9 319 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 SLC19A3Q9BZV2 496 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 MED4Q9NPJ6 270 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 USP22Q9UPT9 525 aa9.44□□□□□ -0.9
SDHD-208ENST00000534010 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 A0A1W2PR80 420 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CIB4A0PJX0 185 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 TRIM64A6NGJ6 449 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 TRIM64BA6NI03 449 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 LRRN3E7EW58 273 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 H7C417 338 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 PLPP3O14495 311 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CLOCKO15516 846 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 MT-ATP6P00846 226 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 OPN1SWP03999 348 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ASAH2BP0C7U1 165 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 TROVE2P10155 538 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDHD-208ENST00000534010 ZNF43P17038 809 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CDH11P55287 796 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CYLC2Q14093 348 aaPredicted RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 ZNF74Q16587 644 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 CYP51A1Q16850 503 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 SWI5Q1ZZU3 235 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ENTPD8Q5MY95 495 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 PHYHD1Q5SRE7 291 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 INTS11Q5TA45 600 aaKnown RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 ZNF544Q6NX49 715 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 SLC46A3Q7Z3Q1 461 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ABHD12BQ7Z5M8 362 aaPredicted RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 PXKQ7Z7A4 578 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 GPAT4Q86UL3 456 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 RANBP3LQ86VV4 465 aaPredicted RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 C20orf196Q8IYI0 205 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ADAMTS16Q8TE57 1224 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 MPP4Q96JB8 637 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ALKBH3Q96Q83 286 aaPredicted RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 MCHR1Q99705 422 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 BDH2Q9BUT1 245 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 POLR2J2Q9GZM3 115 aaKnown RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 POLR2J3Q9H1A7 115 aaKnown RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 CACYBPQ9HB71 228 aaKnown RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 TMEM27Q9HBJ8 222 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 GPR35Q9HC97 309 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 MEPEQ9NQ76 525 aaPredicted RBP9.43□□□□□ -0.9
SDHD-208ENST00000534010 B3GNT2Q9NY97 397 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 ZNF224Q9NZL3 707 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 UPB1Q9UBR1 384 aa9.43□□□□□ -0.9
SDHD-208ENST00000534010 TRAPPC13A5PLN9 417 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 ZNF587BE7ETH6 402 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 H7C1Q1 480 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 ATP8B1O43520 1251 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 NDUFS7O75251 213 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 LY6G6DO95868 133 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 MDH1P40925 334 aaKnown RBP9.42□□□□□ -0.9
SDHD-208ENST00000534010 ZNF83P51522 516 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 ZNF133P52736 654 aaPredicted RBP9.42□□□□□ -0.9
SDHD-208ENST00000534010 ATP5J2P56134 94 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 CLDN17P56750 224 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 PRPS1P60891 318 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 PUDPQ08623 228 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 HIST3H3Q16695 136 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 C9orf135Q5VTT2 229 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 NIPAL3Q6P499 406 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 ANKRD16Q6P6B7 361 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 KLHL17Q6TDP4 642 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 MYPOPQ86VE0 399 aaPredicted RBP9.42□□□□□ -0.9
SDHD-208ENST00000534010 OR10H5Q8NGA6 315 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 RASSF5Q8WWW0 418 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 SLC25A36Q96CQ1 311 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 EPYCQ99645 322 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 SH3GL1Q99961 368 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 MYLK2Q9H1R3 596 aa9.42□□□□□ -0.9
SDHD-208ENST00000534010 FKRPQ9H9S5 495 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms