RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CLEC2AQ6UVW9 174 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 LINGO2Q7L985 606 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 PTOV1Q86YD1 416 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 UEVLDQ8IX04 471 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 PIK3C3Q8NEB9 887 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-211ENST00000533492 SLC38A2Q96QD8 506 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 MCHR1Q99705 422 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 ASPNQ9BXN1 380 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 MOV10Q9HCE1 1003 aaKnown RBP13.48□□□□□ -0.25
CPSF1-211ENST00000533492 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 B3GAT1Q9P2W7 334 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 ABCA2Q9BZC7 2435 aa13.48□□□□□ -0.25
CPSF1-211ENST00000533492 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 LOC102725191A0A1B0GVB3 256 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 FZD7O75084 574 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 H2AFXP16104 143 aaPredicted RBP13.47□□□□□ -0.25
CPSF1-211ENST00000533492 CDH12P55289 794 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 TUBA1BP68363 451 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 TUBA4AP68366 448 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 ARF1P84077 181 aaKnown RBP13.47□□□□□ -0.25
CPSF1-211ENST00000533492 PMS2P3Q13401 168 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
CPSF1-211ENST00000533492 DNM1P46Q6ZS02 220 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 TUBA1AQ71U36 451 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 SLC30A8Q8IWU4 369 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 ADPRHL1Q8NDY3 354 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 SLC26A7Q8TE54 656 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 HTRA1Q92743 480 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 WFDC6Q9BQY6 131 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF385DQ9H6B1 395 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 CRLF2Q9HC73 371 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 JMJD1CQ15652 2540 aa13.47□□□□□ -0.25
CPSF1-211ENST00000533492 MS4A18H0YCH9 400 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 H7C417 338 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 M0R3H8 397 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 TPST2O60704 377 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 OPN1SWP03999 348 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 C8BP07358 591 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 AHCYP23526 432 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 PCBP3P57721 371 aaKnown RBP13.46□□□□□ -0.25
CPSF1-211ENST00000533492 SELPLGQ14242 412 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 DUSP7Q16829 419 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 CEACAM16Q2WEN9 425 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 MS4A18Q3C1V0 323 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 INTS11Q5TA45 600 aaKnown RBP13.46□□□□□ -0.25
CPSF1-211ENST00000533492 CARD17Q5XLA6 110 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 ZNF613Q6PF04 617 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 PATL1Q86TB9 770 aaKnown RBP13.46□□□□□ -0.25
CPSF1-211ENST00000533492 SCAIQ8N9R8 606 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 OR10A6Q8NH74 314 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 SLC41A3Q96GZ6 507 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 TMEM43Q9BTV4 400 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 KATNB1Q9BVA0 655 aa13.46□□□□□ -0.25
CPSF1-211ENST00000533492 KAT8Q9H7Z6 458 aaKnown RBP13.46□□□□□ -0.25
CPSF1-211ENST00000533492 ABCA1O95477 2261 aa13.46□□□□□ -0.26
CPSF1-211ENST00000533492 IGHV4-30-2A0A087WSY4 118 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF726A6NNF4 738 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 M0R3G1 203 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 TRAF3IP2O43734 574 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 FMO6PO60774 539 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 OR6A2O95222 327 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 BGLAPP02818 100 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 CAPZA2P47755 286 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 EFNA4P52798 201 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 NAAAQ02083 359 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 CYLC2Q14093 348 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 OR10H5Q8NGA6 315 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 FAM168AQ92567 244 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 EMC6Q9BV81 110 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 NELFAQ9H3P2 528 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 MRPL39Q9NYK5 338 aaKnown RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 CRNNQ9UBG3 495 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-211ENST00000533492 NOX1Q9Y5S8 564 aa13.45□□□□□ -0.26
CPSF1-211ENST00000533492 CR1P17927 2039 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CPSF4LA6NMK7 179 aaKnown RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 VSTM5A8MXK1 200 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF99A8MXY4 864 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CHP2O43745 196 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 HPRP00739 348 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 MT-ATP6P00846 226 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 VIMP08670 466 aaKnown RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CECR9P0C854 216 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 HLA-DOBP13765 273 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CBR1P16152 277 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms