RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 FAM3CQ92520 227 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 HIST1H2ACQ93077 130 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 PNPLA2Q96AD5 504 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 ZNF578Q96N58 590 aaPredicted RBP15.18■□□□□ 0.02
CTSB-228ENST00000533455 ALG12Q9BV10 488 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 TSPAN10Q9H1Z9 355 aaPredicted RBP15.18■□□□□ 0.02
CTSB-228ENST00000533455 TCF7L1Q9HCS4 588 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 RXFP3Q9NSD7 469 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 SCML1Q9UN30 329 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 RWDD3Q9Y3V2 267 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 TP53BP1Q12888 1972 aaPredicted RBP15.18■□□□□ 0.02
CTSB-228ENST00000533455 FANCMQ8IYD8 2048 aa15.18■□□□□ 0.02
CTSB-228ENST00000533455 SLC31A1O15431 190 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 UPK3AO75631 287 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 NMBP08949 121 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 TACSTD2P09758 323 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 MAP2K6P52564 334 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 DLX5P56178 289 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 ALKBH1Q13686 389 aaKnown RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 HLXQ14774 488 aaPredicted RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 CSRP2Q16527 193 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SLC16A9Q7RTY1 509 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SLC36A1Q7Z2H8 476 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 NAXDQ8IW45 347 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SCARB1Q8WTV0 552 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 HMGB4Q8WW32 186 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 KLHL15Q96M94 604 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 LINC00052Q96N35 136 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SESN1Q9Y6P5 492 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 POM121BA6NF01 834 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 C5orf67F2Z3F1 127 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 FOXS1O43638 330 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 RGS11O94810 467 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 EGFP01133 1207 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 PTHLHP12272 177 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 S100A11P31949 105 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 FAUP35544 74 aaKnown RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 PSMD4P55036 377 aaKnown RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 PRPS1P60891 318 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SEC61A1P61619 476 aaKnown RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 ERVK-25P63136 954 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 NFATC4Q14934 902 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 ENPP7Q6UWV6 458 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 FAM220AQ7Z4H9 259 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 GLB1L2Q8IW92 636 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 OR4N2Q8NGD1 307 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 OR10G6Q8NH81 332 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 CCL4L1Q8NHW4 92 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 BAHD1Q8TBE0 780 aaPredicted RBP15.17■□□□□ 0.02
CTSB-228ENST00000533455 ASB12Q8WXK4 309 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 SLC19A3Q9BZV2 496 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 CAPN10Q9HC96 672 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 GDE1Q9NZC3 331 aa15.17■□□□□ 0.02
CTSB-228ENST00000533455 TRBV23OR9-2A0A075B6M9 112 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 A0A1B0GVT2 93 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 OR6C74A6NCV1 312 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 H7C417 338 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 PYCARD-AS1I3L0S3 204 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 PSMD9O00233 223 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 ABHD16AO95870 558 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 VSIG10L2P0DP72 767 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 NAGAP17050 411 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 CSRP1P21291 193 aaKnown RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 GRPRP30550 384 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 NUP62P37198 522 aaPredicted RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 ACTR1BP42025 376 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 ACTR1AP61163 376 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 RBMS2Q15434 407 aaKnown RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 TCEA2Q15560 299 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 LEG1Q6P5S2 330 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 NHLRC1Q6VVB1 395 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 ZNF595Q8IYB9 648 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 OR5AK2Q8NH90 309 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 WDR89Q96FK6 387 aaPredicted RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 VSTM2LQ96N03 204 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 WSB2Q9NYS7 404 aaPredicted RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 MTFP1Q9UDX5 166 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 OPN4Q9UHM6 478 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 MRM2Q9UI43 246 aaKnown RBP15.16■□□□□ 0.02
CTSB-228ENST00000533455 MOKQ9UQ07 419 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 A0A087WV48 116 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TBC1D3DA0A087WVF3 549 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 UBE2QL1A1L167 161 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TBC1D3LB9A6J9 549 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 XRCC3O43542 346 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 OR10H2O60403 315 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 RP2O75695 350 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 IGF2P01344 180 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TBC1D3HP0C7X1 549 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 OR8G3PP0DMU2 310 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 PPP3CBP16298 524 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 CTRB1P17538 263 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 LSSP48449 732 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 GXYLT1Q4G148 440 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 CTRB2Q6GPI1 263 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TBC1D3CQ6IPX1 549 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TMEM81Q6P7N7 255 aa15.16■□□□□ 0.02
CTSB-228ENST00000533455 TMUB2Q71RG4 321 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms