RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TMEM239Q8WW34 195 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 BOD1Q96IK1 185 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 HS6ST2Q96MM7 605 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 MAN2C1Q9NTJ4 1040 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 MAGEL2Q9UJ55 1249 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 ZNF229Q9UJW7 825 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 ENO4A6NNW6 628 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 RAD51DO75771 328 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 HLA-DOBP13765 273 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 FUT4P22083 530 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 MPGP29372 298 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 NR1H2P55055 460 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 ZP4Q12836 540 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 C1DQ13901 141 aaKnown RBP17.98■□□□□ 0.47
CCS-208ENST00000533244 FKBP9P1Q75LS8 142 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 PXKQ7Z7A4 578 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 UEVLDQ8IX04 471 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 TMEM123Q8N131 208 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 RBM15BQ8NDT2 890 aaKnown RBP17.98■□□□□ 0.47
CCS-208ENST00000533244 PFN4Q8NHR9 129 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 BCAS4Q8TDM0 211 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 NINJ1Q92982 152 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 TMEM204Q9BSN7 226 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 NANSQ9NR45 359 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 SAMD4AQ9UPU9 718 aaKnown RBP17.98■□□□□ 0.47
CCS-208ENST00000533244 NOX1Q9Y5S8 564 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 B2RBV5 119 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 J3KTA2 159 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 TCN1P20061 433 aaPredicted RBP17.98■□□□□ 0.47
CCS-208ENST00000533244 CALB2P22676 271 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 MXRA7P84157 204 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 LGALS3BPQ08380 585 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 OR7E24Q6IFN5 339 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 PAMR1Q6UXH9 720 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 LINGO2Q7L985 606 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 ABHD12BQ7Z5M8 362 aaPredicted RBP17.98■□□□□ 0.47
CCS-208ENST00000533244 LRRC17Q8N6Y2 441 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 FAM86B1Q8N7N1 296 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 OR2M2Q96R28 347 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 C20orf141Q9NUB4 165 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 TAS2R5Q9NYW4 299 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 ST6GALNAC2Q9UJ37 374 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 ENPP4Q9Y6X5 453 aa17.98■□□□□ 0.47
CCS-208ENST00000533244 RAI1Q7Z5J4 1906 aaPredicted RBP17.97■□□□□ 0.47
CCS-208ENST00000533244 CIB4A0PJX0 185 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 AKAP8O43823 692 aaKnown RBP17.97■□□□□ 0.47
CCS-208ENST00000533244 UPK3AO75631 287 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 IFNA8P32881 189 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 YAP1P46937 504 aaKnown RBP17.97■□□□□ 0.47
CCS-208ENST00000533244 POU3F1Q03052 451 aaPredicted RBP17.97■□□□□ 0.47
CCS-208ENST00000533244 PPA1Q15181 289 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 STK11Q15831 433 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 C17orf78Q8N4C9 275 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 ANKK1Q8NFD2 765 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 PLPPR2Q96GM1 343 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 C7orf34Q96L11 122 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 ALKBH3Q96Q83 286 aaPredicted RBP17.97■□□□□ 0.47
CCS-208ENST00000533244 MED31Q9Y3C7 131 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 SLC25A15Q9Y619 301 aa17.97■□□□□ 0.47
CCS-208ENST00000533244 ALPK2Q86TB3 2170 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 HTR3EA5X5Y0 456 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 RPL36A-HNRNPH2H7BZ11 118 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 ARPC2O15144 300 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 SLC43A1O75387 559 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 GMNNO75496 209 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 OR7A10O76100 309 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 SEMG1P04279 462 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 TSPAN19P0C672 248 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 ADORA3P0DMS8 318 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 MSX2P35548 267 aaPredicted RBP17.96■□□□□ 0.47
CCS-208ENST00000533244 IL1RL1Q01638 556 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 TGFBR3Q03167 851 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 NCMAPQ5T1S8 102 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 C1QTNF12Q5T7M4 302 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 C9orf135Q5VTT2 229 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 MUCL1Q96DR8 90 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 SGTBQ96EQ0 304 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 FNDC11Q9BVV2 318 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 NGBQ9NPG2 151 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 RHCGQ9UBD6 479 aa17.96■□□□□ 0.47
CCS-208ENST00000533244 ZNF587BE7ETH6 402 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 ROS1P08922 2347 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 LSM11P83369 360 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCS-208ENST00000533244 TRAM2Q15035 370 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 IQCCQ4KMZ1 466 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 RINLQ6ZS11 566 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 WDFY1Q8IWB7 410 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 ARHGAP24Q8N264 748 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 WDR31Q8NA23 367 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 PIK3C3Q8NEB9 887 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 TXNDC15Q96J42 360 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 ANKRD19PQ9H560 264 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 SLC17A5Q9NRA2 495 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 MED29Q9NX70 200 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 NPAP1Q9NZP6 1156 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 NDUFAF4Q9P032 175 aa17.95■□□□□ 0.46
CCS-208ENST00000533244 PIP5K1CO60331 668 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 OR6A2O95222 327 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 FUT1P19526 365 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms