RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 PKNOX1P55347 436 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 CCL8P80075 99 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 NOXRED1Q6NXP6 359 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 NIPAL3Q6P499 406 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 CCDC121Q6ZUS5 278 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 CPLX4Q7Z7G2 160 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 MDP1Q86V88 176 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 ZIC4Q8N9L1 334 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 OR56A1Q8NGH5 318 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 CIDECQ96AQ7 238 aaPredicted RBP11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 MRPL46Q9H2W6 279 aaKnown RBP11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 NELFAQ9H3P2 528 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 SAP30LQ9HAJ7 183 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 INTS9Q9NV88 658 aaKnown RBP11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 SLC7A8Q9UHI5 535 aa11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 LEF1Q9UJU2 399 aaPredicted RBP11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
CLNS1A-211ENST00000532069 TET2Q6N021 2002 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 RPL36A-HNRNPH2H7BZ11 118 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 OPN1MWP04001 364 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 OPN1MW2P0DN77 364 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 OPN1MW3P0DN78 364 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 TAC1P20366 129 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 SELENOPP49908 381 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 HTR6P50406 440 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 ZNF141Q15928 474 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 GSG1Q2KHT4 349 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 USP51Q70EK9 711 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 CCDC197Q8NCU1 140 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 EPS8L3Q8TE67 593 aaKnown RBP11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 MOAP1Q96BY2 351 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 SLC47A1Q96FL8 570 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 DIRC2Q96SL1 478 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 TAPBPLQ9BX59 468 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 DENND2DQ9H6A0 471 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 REEP4Q9H6H4 257 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 NECAP2Q9NVZ3 263 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 NINJ2Q9NZG7 142 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 TAAR3PQ9P1P4 343 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 ARHGAP32A7KAX9 2087 aa11.03□□□□□ -0.64
CLNS1A-211ENST00000532069 TENM3Q9P273 2699 aa11.02□□□□□ -0.64
CLNS1A-211ENST00000532069 PLXNB1O43157 2135 aa11.02□□□□□ -0.64
CLNS1A-211ENST00000532069 TMED7-TICAM2A0A0A6YYA0 188 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 AQP7P3A6NL99 342 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 DUXAA6NLW8 204 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 A8MT66 165 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 FRS3O43559 492 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 IMPDH2P12268 514 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 UQCRBP14927 111 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 CCNA2P20248 432 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 KLF3P57682 345 aaPredicted RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 BPIFB3P59826 476 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 ARF1P84077 181 aaKnown RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 GPR68Q15743 365 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 PRAMEF8Q5VWM4 474 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 PRAMEF7Q5VXH5 474 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 RGS7BPQ6MZT1 257 aaPredicted RBP11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 GPR137CQ8N3F9 429 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 SPICQ8N5J4 248 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 MTERF3Q96E29 417 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 IL20RAQ9UHF4 553 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 TMED7Q9Y3B3 224 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 POMT1Q9Y6A1 747 aa11.02□□□□□ -0.65
CLNS1A-211ENST00000532069 LOC100653049A0A140TA62 436 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 TRIM49D1C9J1S8 452 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 SLC43A1O75387 559 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 STX11O75558 287 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 KRT34O76011 436 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 RAB36O95755 333 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 ZNF35P13682 527 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 RYKP34925 604 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 LCP2Q13094 533 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 FXNQ16595 210 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 MSMPQ1L6U9 139 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 SPDYE7PQ495Y7 208 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 BTNL3Q6UXE8 466 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 ZNF620Q6ZNG0 422 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 CREB3L2Q70SY1 520 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 LRP11Q86VZ4 500 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 KLHL36Q8N4N3 616 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 TMEM99Q8N816 258 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 SGCDQ92629 289 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 FAM71F1Q96KD3 344 aaPredicted RBP11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 SDF2Q99470 211 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 GATA5Q9BWX5 397 aaPredicted RBP11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 SSU72Q9NP77 194 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 EXOSC3Q9NQT5 275 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 MYEF2Q9P2K5 600 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 OR5V1Q9UGF6 321 aa11.01□□□□□ -0.65
CLNS1A-211ENST00000532069 RCE1Q9Y256 329 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms