RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 REV1Q9UBZ9 1251 aa7.69□□□□□ -1.18
USF1-210ENST00000531842 MARCOQ9UEW3 520 aaPredicted RBP7.69□□□□□ -1.18
USF1-210ENST00000531842 TRAPPC4Q9Y296 219 aa7.69□□□□□ -1.18
USF1-210ENST00000531842 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.69□□□□□ -1.18
USF1-210ENST00000531842 GRIP1Q9Y3R0 1128 aa7.69□□□□□ -1.18
USF1-210ENST00000531842 PCDHB14Q9Y5E9 798 aa7.69□□□□□ -1.18
USF1-210ENST00000531842 CACNG2Q9Y698 323 aa7.69□□□□□ -1.18
USF1-210ENST00000531842 A0A0G2JK05 382 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 AQP7P3A6NL99 342 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 DNPH1O43598 174 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 EIF1BO60739 113 aaKnown RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 RP2O75695 350 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 SASH3O75995 380 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 MPZL1O95297 269 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 IGKV3-15P01624 115 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 HLA-HP01893 362 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 UQCRBP14927 111 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 S100A3P33764 101 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 CAPZA2P47755 286 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 POLR2HP52434 150 aaKnown RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 AQP5P55064 265 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 CLDN17P56750 224 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 PIGFQ07326 219 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 SYPL1Q16563 259 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 ZNF311Q5JNZ3 666 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 CREB3L2Q70SY1 520 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 JAZF1Q86VZ6 243 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 RNF130Q86XS8 419 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 BCL6BQ8N143 479 aaPredicted RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 TRIML2Q8N7C3 387 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 POMGNT2Q8NAT1 580 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 OR8J2Q8NGG1 315 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 OR51F2Q8NH61 342 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 OIT3Q8WWZ8 545 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 PMM1Q92871 262 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 WDR55Q9H6Y2 383 aaPredicted RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 UNKLQ9H9P5 680 aaKnown RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 EXOSC3Q9NQT5 275 aaKnown RBP7.68□□□□□ -1.18
USF1-210ENST00000531842 RLIMQ9NVW2 624 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 CORINQ9Y5Q5 1042 aa7.68□□□□□ -1.18
USF1-210ENST00000531842 CFAP73A6NFT4 308 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CCDC154A6NI56 674 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 M0R233 179 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 DEAF1O75398 565 aaPredicted RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 CLPTM1O96005 669 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 ERCC1P07992 297 aaPredicted RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 CHRM4P08173 479 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 GUSBP08236 651 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 PATE4P0C8F1 98 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 HKR1P10072 659 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 NR2F1P10589 423 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 PRG2P13727 222 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CBR1P16152 277 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 IL7RP16871 459 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 LBPP18428 481 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 PCMT1P22061 227 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CBLP22681 906 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 NR4A1P22736 598 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 OMGP23515 440 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CXCR1P25024 350 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 ANXA11P50995 505 aaKnown RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 CLNS1AP54105 237 aaKnown RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 ZP4Q12836 540 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CEACAM16Q2WEN9 425 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 SLC9B1Q4ZJI4 515 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 SPANXN4Q5MJ08 99 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 AGBL2Q5U5Z8 902 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CARD17Q5XLA6 110 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 SAXO2Q658L1 398 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 TMEM225Q6GV28 225 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 SHISA2Q6UWI4 295 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 ZNF621Q6ZSS3 439 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 USP43Q70EL4 1123 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 C1QL2Q7Z5L3 287 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 BPIFB2Q8N4F0 458 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 BHLHE22Q8NFJ8 381 aaPredicted RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 SLC25A36Q96CQ1 311 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 NEURL3Q96EH8 262 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 BOD1Q96IK1 185 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 MAELQ96JY0 434 aaKnown RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 ZNF48Q96MX3 618 aaPredicted RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 ANKRD27Q96NW4 1050 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 TRNT1Q96Q11 434 aaKnown RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 PANX1Q96RD7 426 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 ZBTB18Q99592 522 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 PAIP2Q9BPZ3 127 aaKnown RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 OR51B6Q9H340 312 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 ZNF665Q9H7R5 613 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 MTHFD2LQ9H903 347 aaPredicted RBP7.67□□□□□ -1.18
USF1-210ENST00000531842 GPR35Q9HC97 309 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 CMAHPQ9Y471 501 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 TANC2Q9HCD6 1990 aa7.67□□□□□ -1.18
USF1-210ENST00000531842 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 AGAP5A6NIR3 686 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 E9PBE3 544 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 HMGN4O00479 90 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 ZNF208O43345 1280 aa7.66□□□□□ -1.18
USF1-210ENST00000531842 FRS3O43559 492 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms