RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 IFT27Q9BW83 186 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 NDEL1Q9GZM8 345 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 CALHM2Q9HA72 323 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 INIPQ9NRY2 104 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 FAM215AQ9Y5M1 114 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 MPDZO75970 2070 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 MCIDASD6RGH6 385 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 VAMP5O95183 116 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 TOP3AQ13472 1001 aaPredicted RBP15.74■□□□□ 0.11
CTSB-222ENST00000531551 EEF1A1P5Q5VTE0 462 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 GTF2IRD2BQ6EKJ0 949 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 ABLIM2Q6H8Q1 611 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 GTF2IRD2Q86UP8 949 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 C9orf106Q8NAJ2 232 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 TSSK6Q9BXA6 273 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 VCX3BQ9H321 246 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 KLHL9Q9P2J3 617 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 B3GAT1Q9P2W7 334 aa15.74■□□□□ 0.11
CTSB-222ENST00000531551 A0A1W2PNV4 684 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 CD8B2A6NJW9 211 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 TP53P04637 393 aaPredicted RBP15.73■□□□□ 0.11
CTSB-222ENST00000531551 CDH2P19022 906 aaPredicted RBP15.73■□□□□ 0.11
CTSB-222ENST00000531551 SLC6A6P31641 620 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 POLR2IP36954 125 aaKnown RBP15.73■□□□□ 0.11
CTSB-222ENST00000531551 PER3P56645 1201 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 ERVK-25P63136 954 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 ZP4Q12836 540 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 SLC17A1Q14916 467 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 RNPS1Q15287 305 aaKnown RBP15.73■□□□□ 0.11
CTSB-222ENST00000531551 RPL13AP3Q6NVV1 102 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 GCNT2Q8N0V5 402 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 PARP8Q8N3A8 854 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 PACRGLQ8N7B6 248 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 ANKK1Q8NFD2 765 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 OR9K2Q8NGE7 335 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 OR8D4Q8NGM9 314 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 WNT2BQ93097 391 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 ZNF570Q96NI8 536 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 KATNB1Q9BVA0 655 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 POLDIP3Q9BY77 421 aaKnown RBP15.73■□□□□ 0.11
CTSB-222ENST00000531551 IL20Q9NYY1 176 aa15.73■□□□□ 0.11
CTSB-222ENST00000531551 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 ZNF716A6NP11 495 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 PPP1R3DO95685 299 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 SNAP29O95721 258 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 HOXD4P09016 255 aaPredicted RBP15.72■□□□□ 0.11
CTSB-222ENST00000531551 TSPAN19P0C672 248 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 CRISP1P54107 249 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 MELKQ14680 651 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 EIF2S3LQ2VIR3 472 aaKnown RBP15.72■□□□□ 0.11
CTSB-222ENST00000531551 PXKQ7Z7A4 578 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 TUSC5Q8IXB3 177 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 IQCF1Q8N6M8 205 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 CLDN22Q8N7P3 220 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 INTS12Q96CB8 462 aaKnown RBP15.72■□□□□ 0.11
CTSB-222ENST00000531551 SF3B5Q9BWJ5 86 aaKnown RBP15.72■□□□□ 0.11
CTSB-222ENST00000531551 RNF122Q9H9V4 155 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 C8orf4Q9NR00 106 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 MED29Q9NX70 200 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 SMPD3Q9NY59 655 aaPredicted RBP15.72■□□□□ 0.11
CTSB-222ENST00000531551 ENOPH1Q9UHY7 261 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 ADAM18Q9Y3Q7 739 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 NOX1Q9Y5S8 564 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 COL6A6A6NMZ7 2263 aa15.72■□□□□ 0.11
CTSB-222ENST00000531551 IFNGR1P15260 489 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 GNLYP22749 145 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 ESRRGP62508 458 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 NPRL3Q12980 569 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 TMEM236Q5W0B7 351 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 SEM1Q6ZVN7 128 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 CREB3L2Q70SY1 520 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 ATCAYQ86WG3 371 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 LRRC75AQ8NAA5 344 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 PRR7Q8TB68 274 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 TXNDC15Q96J42 360 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 TM9SF2Q99805 663 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 EMC6Q9BV81 110 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 TOR3AQ9H497 397 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 IER3IP1Q9Y5U9 82 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 IL2RAP01589 272 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 EPHA2P29317 976 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 NOS3P29474 1203 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 VHLP40337 213 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 CLDN17P56750 224 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 PMPCAQ10713 525 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 GINS1Q14691 196 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 PTGES3Q15185 160 aaKnown RBP15.71■□□□□ 0.11
CTSB-222ENST00000531551 ACKR1Q16570 336 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 DPY19L2P2Q6ZN68 376 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 NCCRP1Q6ZVX7 275 aaPredicted RBP15.71■□□□□ 0.11
CTSB-222ENST00000531551 SLC35D2Q76EJ3 337 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 GALNT11Q8NCW6 608 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 OR2T33Q8NG76 320 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 ERMAPQ96PL5 475 aaPredicted RBP15.71■□□□□ 0.11
CTSB-222ENST00000531551 ZNF385AQ96PM9 386 aaKnown RBP15.71■□□□□ 0.11
CTSB-222ENST00000531551 TTYH2Q9BSA4 534 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 EMC3Q9P0I2 261 aa15.71■□□□□ 0.11
CTSB-222ENST00000531551 ZNF346Q9UL40 294 aaKnown RBP15.71■□□□□ 0.11
CTSB-222ENST00000531551 MBD3L4A6NDZ8 208 aaPredicted RBP15.7■□□□□ 0.1
CTSB-222ENST00000531551 MBD3L3A6NE82 208 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms