RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CRYAAP02489 173 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 HNRNPCL4P0DMR1 293 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 PAX7P23759 505 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 NR4A2P43354 598 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 GZMKP49863 264 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 CRISP3P54108 245 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 DSTNP60981 165 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 UBE2NP61088 152 aaKnown RBP11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 NFYCQ13952 458 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 PRAMEF8Q5VWM4 474 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 PRAMEF7Q5VXH5 474 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 NIPAL3Q6P499 406 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 ANKRD16Q6P6B7 361 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 LINGO2Q7L985 606 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 SERPINA11Q86U17 422 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 ARIH2OSQ8N7S6 290 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 MAGEE2Q8TD90 523 aaPredicted RBP11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 STK35Q8TDR2 534 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 C3orf49Q96BT1 292 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 TMEM19Q96HH6 336 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 ITCHQ96J02 903 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 SORCS2Q96PQ0 1159 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 KCNS3Q9BQ31 491 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 KATNB1Q9BVA0 655 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 SPATA9Q9BWV2 254 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 SHARPINQ9H0F6 387 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 TPT1P8Q9HAU6 139 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 CA10Q9NS85 328 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 GID8Q9NWU2 228 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 CRNNQ9UBG3 495 aaPredicted RBP11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 FKBP7Q9Y680 259 aa11.15□□□□□ -0.62
TM9SF1-211ENST00000531406 CUBNO60494 3623 aa11.15□□□□□ -0.63
TM9SF1-211ENST00000531406 A0A096LPI6 279 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 B2RBV5 119 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 B9A039 149 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 FTCDNL1E5RQL4 147 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 AHSA1O95433 338 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 ANP32DO95626 131 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 NPPAP01160 153 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 TUBA1BP68363 451 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 TUBA4AP68366 448 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 NAAAQ02083 359 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 ADIPOQQ15848 244 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 TRMT5Q32P41 509 aaKnown RBP11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 GTDC1Q4AE62 458 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 HACD2Q6Y1H2 254 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC46A3Q7Z3Q1 461 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 DHDDSQ86SQ9 333 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 MFSD8Q8NHS3 518 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 VPS33AQ96AX1 596 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC25A36Q96CQ1 311 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 FOXN4Q96NZ1 517 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 ALKBH3Q96Q83 286 aaPredicted RBP11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 VRK1Q99986 396 aaPredicted RBP11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 LINC00470Q9BZP3 86 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 C1orf21Q9H246 121 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 CACYBPQ9HB71 228 aaKnown RBP11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 THUMPD1Q9NXG2 353 aaKnown RBP11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 IFT52Q9Y366 437 aa11.14□□□□□ -0.63
TM9SF1-211ENST00000531406 A0A096LPE4 126 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 IGHV4-61A0A0C4DH41 118 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 LOC100289279A0A1B0GTE1 492 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 LOC390937A0A1W2PQ73 354 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC35F4A4IF30 521 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 FBP2O00757 339 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 GYG2O15488 501 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 OR4A8P0C604 315 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 CECR9P0C854 216 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 T-ENOLP0DO92 83 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 PNMTP11086 282 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 THBS2P35442 1172 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 SH3BGRP55822 239 aaPredicted RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 NCALDP61601 193 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 HOXC5Q00444 222 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 ROR2Q01974 943 aaKnown RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 EGR4Q05215 589 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 EFNB3Q15768 340 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 CARTPTQ16568 116 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF311Q5JNZ3 666 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 FAM166AQ6J272 317 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 ARHGAP24Q8N264 748 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 KDM8Q8N371 416 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 DPP10Q8N608 796 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 FAM169BQ8N8A8 192 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 PTDSS2Q9BVG9 487 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 LRMDAQ9H2I8 198 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms