RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 C5orf63A6NC05 138 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 AQP7P3A6NL99 342 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 C17orf100A8MU93 164 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 SRRM5B3KS81 715 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 TBX19O60806 448 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 SHOX2O60902 331 aaPredicted RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 ERLIN1O75477 346 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 CLPXO76031 633 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 CRYBA1P05813 215 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 SBK3P0C264 359 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 FKBP2P26885 142 aaKnown RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 HSD17B3P37058 310 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 CRYBB2P43320 205 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 MAGEA12P43365 314 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 CAPZA2P47755 286 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 PROK1P58294 105 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 CCL8P80075 99 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ARF1P84077 181 aaKnown RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 TEKQ02763 1124 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 PDE7AQ13946 482 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 PDCD1Q15116 288 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ZNF141Q15928 474 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 FXNQ16595 210 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 IMPG1Q17R60 797 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 GLIPR1L2Q4G1C9 344 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 GKAP1Q5VSY0 366 aaPredicted RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 RUSC1-AS1Q66K80 236 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 NOXRED1Q6NXP6 359 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 NIPAL3Q6P499 406 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 USP51Q70EK9 711 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 GPAT4Q86UL3 456 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 TMEM99Q8N816 258 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 IL17RDQ8NFM7 739 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 KIF18AQ8NI77 898 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 FAM76AQ8TAV0 307 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ST7LQ8TDW4 575 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ADAMTS15Q8TE58 950 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 PPCDCQ96CD2 204 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 DDIT4LQ96D03 193 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 TMEM237Q96Q45 408 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 LYSTQ99698 3801 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ACTRT3Q9BYD9 372 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 LINC00470Q9BZP3 86 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 MRPL46Q9H2W6 279 aaKnown RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 PIF1Q9H611 641 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 MARCH7Q9H992 704 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 AURKAIP1Q9NWT8 199 aaPredicted RBP6.95□□□□□ -1.3
CD44-232ENST00000531118 UBAP1Q9NZ09 502 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 SNX24Q9Y343 169 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 TIMM22Q9Y584 194 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 NOX1Q9Y5S8 564 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 DSPPQ9NZW4 1301 aa6.95□□□□□ -1.3
CD44-232ENST00000531118 TMED7-TICAM2A0A0A6YYA0 188 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
CD44-232ENST00000531118 NPIPB8E9PQR5 432 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 H0YL77 283 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 ZNF208O43345 1280 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 FRS3O43559 492 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 SUPT7LO94864 414 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 ZNF432O94892 652 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 AKR7A3O95154 331 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 PLATP00750 562 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 KRT16P08779 473 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 CSF1P09603 554 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 ZNF35P13682 527 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 RYKP34925 604 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 PGM1P36871 562 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 P2RY4P51582 365 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 TP53BP2Q13625 1128 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 GPR68Q15743 365 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 UAP1Q16222 522 aaPredicted RBP6.94□□□□□ -1.3
CD44-232ENST00000531118 PCGF3Q3KNV8 242 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 UNC50Q53HI1 259 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 ZNF678Q5SXM1 525 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 EIF3MQ7L2H7 374 aaKnown RBP6.94□□□□□ -1.3
CD44-232ENST00000531118 OLIG3Q7RTU3 272 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 LRRC8AQ8IWT6 810 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 OR56A1Q8NGH5 318 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 OR5D16Q8NGK9 328 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 SNX33Q8WV41 574 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 RAB1CQ92928 201 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 TSPAN32Q96QS1 320 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 MRPL57Q9BQC6 102 aaKnown RBP6.94□□□□□ -1.3
CD44-232ENST00000531118 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 SAP30LQ9HAJ7 183 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 HINT3Q9NQE9 182 aaKnown RBP6.94□□□□□ -1.3
CD44-232ENST00000531118 TNFRSF19Q9NS68 423 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 SLC6A13Q9NSD5 602 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 GPATCH2Q9NW75 528 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 NKIRAS2Q9NYR9 191 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 TAAR3PQ9P1P4 343 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 STK38LQ9Y2H1 464 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 TMED7Q9Y3B3 224 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 INSIG2Q9Y5U4 225 aa6.94□□□□□ -1.3
CD44-232ENST00000531118 LIPT2A6NK58 231 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 A8MXK9 166 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms