RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TMEM99Q8N816 258 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 OR4K1Q8NGD4 311 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 ZFP42Q96MM3 310 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 GFI1Q99684 422 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 PAAF1Q9BRP4 392 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 GPR62Q9BZJ7 368 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 UBQLN4Q9NRR5 601 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 H2AFY2Q9P0M6 372 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-214ENST00000530886 IL20RAQ9UHF4 553 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 ZNF230Q9UIE0 474 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-214ENST00000530886 THSD7BQ9C0I4 1608 aa7.46□□□□□ -1.21
CSDE1-214ENST00000530886 FKTNO75072 461 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 MPC1LP0DKB6 136 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 EDN3P14138 238 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 GPR15P49685 360 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 PNLIPRP1P54315 467 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 UCP2P55851 309 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 PFN3P60673 137 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 UBE2MP61081 183 aaKnown RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 RPS11P62280 158 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 LSM11P83369 360 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 KIAA0141Q14154 515 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 RPE65Q16518 533 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SYPL1Q16563 259 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 AWAT1Q58HT5 328 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 FAM71E1Q6IPT2 247 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 INO80EQ8NBZ0 244 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SLC2A12Q8TD20 617 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 KIRREL1Q96J84 757 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 CAMK1GQ96NX5 476 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 ADAM2Q99965 735 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 TMEM106CQ9BVX2 250 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 LINC00597Q9H2U6 94 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 IL21RQ9HBE5 538 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 HINT3Q9NQE9 182 aaKnown RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 TDP1Q9NUW8 608 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 A0A087WUU8 490 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 CDHR4A6H8M9 788 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 NPC1O15118 1278 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 RLN1P04808 185 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 BCHEP06276 602 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 AKAIN1P0CW23 69 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 ACRV1P26436 265 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 PRKXP51817 358 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 CXCL9Q07325 125 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 GPR137CQ8N3F9 429 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 COMMD1Q8N668 190 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 KLHDC9Q8NEP7 349 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 OR51G2Q8NGK0 314 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 OR1J2Q8NGS2 313 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 OR13D1Q8NGV5 346 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 RPS4Y2Q8TD47 263 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 GHSRQ92847 366 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 GCDHQ92947 438 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SMIM19Q96E16 107 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 LRIG1Q96JA1 1093 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SAMD8Q96LT4 415 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SLC25A21Q9BQT8 299 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-214ENST00000530886 ACTRT3Q9BYD9 372 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 PARP11Q9NR21 331 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 SIRT7Q9NRC8 400 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 ZDHHC8Q9ULC8 765 aa7.46□□□□□ -1.22
CSDE1-214ENST00000530886 A0A0D9SEW6 157 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ANTXRLA6NF34 631 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 SOCS6O14544 535 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 NSG1P42857 185 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 AIMP2Q13155 320 aaKnown RBP7.45□□□□□ -1.22
CSDE1-214ENST00000530886 UPP1Q16831 310 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 KRBOX4Q5JUW0 171 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 CYB5R2Q6BCY4 276 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 CD163Q86VB7 1156 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 OR10D4PQ8NGN7 298 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 RNASEH2CQ8TDP1 164 aaKnown RBP7.45□□□□□ -1.22
CSDE1-214ENST00000530886 HPSE2Q8WWQ2 592 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ASB11Q8WXH4 323 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 SULT4A1Q9BR01 284 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ACBD6Q9BR61 282 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 MARCH5Q9NX47 278 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 HAO2Q9NYQ3 351 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 DOK5Q9P104 306 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ASF1AQ9Y294 204 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 TIMM13Q9Y5L4 95 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-214ENST00000530886 TICRRQ7Z2Z1 1910 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 DLEU1O43261 78 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 TBX19O60806 448 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 SFTPBP07988 381 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 LYL1P12980 280 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 CDK2P24941 298 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 CFPP27918 469 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 HTR2CP28335 458 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 PCSK1P29120 753 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 MPIP34949 423 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ACTC1P68032 377 aa7.45□□□□□ -1.22
CSDE1-214ENST00000530886 ACTA1P68133 377 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms