RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 JMJD8Q96S16 334 aa13.85□□□□□ -0.19
COL16A1-216ENST00000529928 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
COL16A1-216ENST00000529928 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
COL16A1-216ENST00000529928 RLIMQ9NVW2 624 aa13.85□□□□□ -0.19
COL16A1-216ENST00000529928 REV1Q9UBZ9 1251 aa13.85□□□□□ -0.19
COL16A1-216ENST00000529928 USP22Q9UPT9 525 aa13.85□□□□□ -0.19
COL16A1-216ENST00000529928 ZNF503-AS2A6NEH8 195 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 NPIPB7O75200 414 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 SLC43A1O75387 559 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 RGS9O75916 674 aaPredicted RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 AHSA1O95433 338 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 C1QCP02747 245 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 NR4A1P22736 598 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 CAPZA2P47755 286 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 CLNS1AP54105 237 aaKnown RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 ELFN2Q5R3F8 820 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 PEG10Q86TG7 708 aaKnown RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 MDP1Q86V88 176 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 OR51F2Q8NH61 342 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 MFSD8Q8NHS3 518 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 MRPL24Q96A35 216 aaKnown RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 CCDC115Q96NT0 180 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 LRRC37BQ96QE4 947 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 PAIP2Q9BPZ3 127 aaKnown RBP13.84□□□□□ -0.19
COL16A1-216ENST00000529928 RACGAP1Q9H0H5 632 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 NARFLQ9H6Q4 476 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 LPAR2Q9HBW0 351 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 GPR35Q9HC97 309 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 BTNL2Q9UIR0 455 aa13.84□□□□□ -0.19
COL16A1-216ENST00000529928 FTCDNL1E5RQL4 147 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 E9PBE3 544 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 SDHDO14521 159 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF432O94892 652 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 ALDOCP09972 364 aaKnown RBP13.83□□□□□ -0.2
COL16A1-216ENST00000529928 PNMTP11086 282 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 NCF2P19878 526 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-216ENST00000529928 EPHA1P21709 976 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
COL16A1-216ENST00000529928 S100A3P33764 101 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 LIMS1P48059 325 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 TMEM33P57088 247 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 CEACAM16Q2WEN9 425 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 LIN52Q52LA3 116 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 OGFOD2Q6N063 350 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 THSD4Q6ZMP0 1018 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF836Q6ZNA1 936 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 KIRREL3Q8IZU9 778 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 MGARPQ8TDB4 240 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 STK35Q8TDR2 534 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 RDH5Q92781 318 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 PANX1Q96RD7 426 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 MRPL37Q9BZE1 423 aaKnown RBP13.83□□□□□ -0.2
COL16A1-216ENST00000529928 THAP1Q9NVV9 213 aa13.83□□□□□ -0.2
COL16A1-216ENST00000529928 MEGF8Q7Z7M0 2845 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 TRAV20A0A0B4J274 112 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF99A8MXY4 864 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-216ENST00000529928 PNPP00491 289 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 HPXP02790 462 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 GAAP10253 952 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 ARFIP2P53365 341 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 FAHD2BQ6P2I3 314 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-216ENST00000529928 CARM1Q86X55 608 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 VRK2Q86Y07 508 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 KDM8Q8N371 416 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 PIK3C3Q8NEB9 887 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 OR52P1PQ8NH57 321 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 SLC25A36Q96CQ1 311 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 FAHD2AQ96GK7 314 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 TREM2Q9NZC2 230 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 CALML5Q9NZT1 146 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 NOX1Q9Y5S8 564 aa13.82□□□□□ -0.2
COL16A1-216ENST00000529928 MGAM2Q2M2H8 2515 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 AKAP8O43823 692 aaKnown RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 GSNP06396 782 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 ANPEPP15144 967 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 LBPP18428 481 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 COL8A2P25067 703 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 GLRXP35754 106 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 LRRC74AQ0VAA2 488 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 C1DQ13901 141 aaKnown RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 AGBL2Q5U5Z8 902 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 MAVSQ7Z434 540 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF837Q96EG3 531 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 TEX37Q96LM6 180 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 OXGR1Q96P68 337 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF416Q9BWM5 594 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 ZNF275Q9NSD4 429 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-216ENST00000529928 B3GNT2Q9NY97 397 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 DSPPQ9NZW4 1301 aa13.81□□□□□ -0.2
COL16A1-216ENST00000529928 WNT9BO14905 357 aa13.8□□□□□ -0.2
COL16A1-216ENST00000529928 HDAC3O15379 428 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms