RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 AKR7A2O43488 359 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 NMT2O60551 498 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 E2F6O75461 281 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 TIMP1P01033 207 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 NPPAP01160 153 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 CCDC172P0C7W6 258 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 PPIAL4FP0DN26 164 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 ATP1B2P14415 290 aaPredicted RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 ATP5C1P36542 298 aaKnown RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 HSD17B2P37059 387 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 KIR2DS4P43632 304 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 C21orf59P57076 290 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF45Q02386 682 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 SYCP1Q15431 976 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 LIN9Q5TKA1 542 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 OR52E8Q6IFG1 317 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 ENPP6Q6UWR7 440 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 VRK2Q86Y07 508 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 FTMTQ8N4E7 242 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 TMEM252Q8N6L7 170 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 OR2L3Q8NG85 312 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 LILRB4Q8NHJ6 448 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 GLYATL2Q8WU03 294 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 NUS1Q96E22 293 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 IFT74Q96LB3 600 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 ATP6V1G3Q96LB4 118 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 C12orf42Q96LP6 360 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 SMIM14Q96QK8 99 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 TGS1Q96RS0 853 aaKnown RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 CNN2Q99439 309 aaKnown RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 HIST1H4GQ99525 98 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 MAPKAP1Q9BPZ7 522 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 MRPL45Q9BRJ2 306 aaKnown RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 CNPY3Q9BT09 278 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 RBKSQ9H477 322 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
C11orf88-204ENST00000529661 MARCH5Q9NX47 278 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 KIF25Q9UIL4 384 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 STAP1Q9ULZ2 295 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 UGT2A1Q9Y4X1 527 aa3.26□□□□□ -1.89
C11orf88-204ENST00000529661 NINLQ9Y2I6 1382 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 IGHV1OR21-1A0A087WYE8 117 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 TRAV25A0A0B4J276 109 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 A0A1W2PPV9 198 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 CCDC182A6NF36 153 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 ZFP92A6NM28 416 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 E7ENQ6 273 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 LOC110117498-PIK3R3F6TDL0 507 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 ABCD4O14678 606 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 TNFSF11O14788 317 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 CETN3O15182 167 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 NVLO15381 856 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 OXSR1O95747 527 aaPredicted RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 GAPDHP04406 335 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 RBMY1CP0DJD4 496 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 MSR1P21757 451 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PRKACBP22694 351 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 IL12AP29459 219 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 HTR1FP30939 366 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 OTX1P32242 354 aaPredicted RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 RDXP35241 583 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 LONP1P36776 959 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 TPMTP51580 245 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 RGS8P57771 180 aaPredicted RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 BST2Q10589 180 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 MERTKQ12866 999 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 KYAT1Q16773 422 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 DGUOKQ16854 277 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PARP15Q460N3 678 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 EOGTQ5NDL2 527 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 RNASEKQ6P5S7 137 aaKnown RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 HSDL2Q6YN16 418 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PGAP1Q75T13 922 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PRSS41Q7RTY9 318 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 GTPBP8Q8N3Z3 284 aaPredicted RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
C11orf88-204ENST00000529661 OR2AP1Q8NGE2 309 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 OR52I1Q8NGK6 324 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 TSNARE1Q96NA8 513 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PANX1Q96RD7 426 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 FMO2Q99518 471 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 ARHGDIGQ99819 225 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 NICN1Q9BSH3 213 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 FAIM2Q9BWQ8 316 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PPA2Q9H2U2 334 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 PTGES2Q9H7Z7 377 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 NMRAL1Q9HBL8 299 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF160Q9HCG1 818 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 LZTFL1Q9NQ48 299 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 CD274Q9NZQ7 290 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 GCNT4Q9P109 453 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 TMCO1Q9UM00 188 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 V9GY05 133 aa3.25□□□□□ -1.89
C11orf88-204ENST00000529661 THSD7BQ9C0I4 1608 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 A0A0J9YYE9 177 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 GOLGA8TH3BQL2 631 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 HIP1O00291 1037 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 YKT6O15498 198 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 MBTPS2O43462 519 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms