RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DHDDSQ86SQ9 333 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 SLC26A11Q86WA9 606 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 CLDN19Q8N6F1 224 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MFSD9Q8NBP5 474 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 C10orf35Q96D05 121 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 PLEKHA8Q96JA3 519 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 CXorf58Q96LI9 332 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 ZNF578Q96N58 590 aaPredicted RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 COPS8Q99627 209 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 AGPAT1Q99943 283 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 PAPOLGQ9BWT3 736 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 HINT2Q9BX68 163 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 ERVK-6Q9BXR3 956 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 NDEL1Q9GZM8 345 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 PARLQ9H300 379 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 LRRN3Q9H3W5 708 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 LYARQ9NX58 379 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 CYTH4Q9UIA0 394 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 DIMT1Q9UNQ2 313 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 POFUT2Q9Y2G5 429 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 POLDIP2Q9Y2S7 368 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 CCDC88AQ3V6T2 1871 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 PSME4Q14997 1843 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 C1orf232A0A0U1RR37 186 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SH3PXD2BA1X283 911 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 ZNF99A8MXY4 864 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 ZNF732B4DXR9 585 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 FBP2O00757 339 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SNAP91O60641 907 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 PDE5AO76074 875 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SERPIND1P05546 499 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 RPSAP08865 295 aaKnown RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 UQCRBP14927 111 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 GATA1P15976 413 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 TNNI1P19237 187 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 TBXA2RP21731 343 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 YWHABP31946 246 aaKnown RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 CDH5P33151 784 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 ITGB3BPQ13352 177 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 KIAA0141Q14154 515 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 OR1C1Q15619 314 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 ZNF776Q68DI1 518 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 TCEAL6Q6IPX3 200 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SCYL2Q6P3W7 929 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 RFWD3Q6PCD5 774 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 Q71RC1 249 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 ARCQ7LC44 396 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 MRPL21Q7Z2W9 205 aaKnown RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 CYP4Z1Q86W10 505 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SERPINA9Q86WD7 417 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 NELFCDQ8IXH7 590 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 DND1Q8IYX4 353 aaKnown RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 Q8N377 158 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SNX31Q8N9S9 440 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 CHDHQ8NE62 594 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 FBXL13Q8NEE6 735 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 OR5M9Q8NGP3 310 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 OR1F12Q8NHA8 337 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 NPRL2Q8WTW4 380 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SMPDL3AQ92484 453 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 RASL10AQ92737 203 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 ADIPOR1Q96A54 375 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 ZNF514Q96K75 400 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 TSSK3Q96PN8 268 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 P2RY13Q9BPV8 354 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 PYGO2Q9BRQ0 406 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 TSSK1BQ9BXA7 367 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 BOLA2Q9H3K6 86 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 CCNB1IP1Q9NPC3 277 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 DMAP1Q9NPF5 467 aaPredicted RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 ADAP2Q9NPF8 381 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 MED4Q9NPJ6 270 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 PXMP2Q9NR77 195 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 STARD5Q9NSY2 213 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 GNG12Q9UBI6 72 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 MRTO4Q9UKD2 239 aaKnown RBP4.71□□□□□ -1.66
PCF11-202ENST00000528336 PSMD13Q9UNM6 376 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 KLHDC2Q9Y2U9 406 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 SCN4AP35499 1836 aa4.71□□□□□ -1.66
PCF11-202ENST00000528336 IGHV3-20A0A0C4DH32 117 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 IGHV3-38A0A0C4DH36 116 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 FBLL1A6NHQ2 334 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 SHISA7A6NL88 538 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 TCP10L2B9ZVM9 353 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 CCNB2O95067 398 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 RETP07949 1114 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 GSTA2P09210 222 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 EDNRAP25101 427 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 CD40LGP29965 261 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 ACADSBP45954 432 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 HMGCS2P54868 508 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 DSCR10P59022 87 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 GPX6P59796 221 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 LMO4P61968 165 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 SIGLEC14Q08ET2 396 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 SLAMF1Q13291 335 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 PMS2P3Q13401 168 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms