RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 LIMS1P48059 325 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 SF3B4Q15427 424 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 ATP6AP1Q15904 470 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 HMBOX1Q6NT76 420 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 PAQR6Q6TCH4 344 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 TMEM179BQ7Z7N9 219 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 AMIGO2Q86SJ2 522 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 CCDC103Q8IW40 242 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 DMRTC2Q8IXT2 367 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 OR13C2Q8NGS9 318 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 PIGXQ8TBF5 258 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 LRTOMTQ8WZ04 291 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 RND1Q92730 232 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 WNT2BQ93097 391 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 BPIFA2Q96DR5 249 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 ASPNQ9BXN1 380 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 FKRPQ9H9S5 495 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 NANSQ9NR45 359 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 ARMC1Q9NVT9 282 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 DNAJB9Q9UBS3 223 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 KCNN3Q9UGI6 736 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 TMCC3Q9ULS5 477 aa10.27□□□□□ -0.77
CCDC90B-210ENST00000528149 AQP7P3A6NL99 342 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 CLOCKO15516 846 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 DNPH1O43598 174 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 OR2T1O43869 369 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 OR10H3O60404 316 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 EIF1BO60739 113 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 CYTIPO60759 359 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 CCNB2O95067 398 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 HPRP00739 348 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 MT-ATP6P00846 226 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 BMP5P22003 454 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 FASP25445 335 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 OMPP47874 163 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 P2RY4P51582 365 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 SIRPAP78324 504 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 H3F3AP84243 136 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 PRKCDQ05655 676 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 RASGEF1BQ0VAM2 473 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 PMS2P3Q13401 168 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 ZFP1Q6P2D0 407 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 VWA1Q6PCB0 445 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 NANOGNBQ7Z5D8 188 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 GPAT4Q86UL3 456 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 HS3ST5Q8IZT8 346 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 OR5J2Q8NH18 312 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 OR6S1Q8NH40 331 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 INTS12Q96CB8 462 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 TM9SF2Q99805 663 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 NAA11Q9BSU3 229 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 RNF122Q9H9V4 155 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 TMEM5Q9Y2B1 443 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 CORINQ9Y5Q5 1042 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
CCDC90B-210ENST00000528149 TRAV27A0A087WT01 109 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 EFCAB9A8MZ26 197 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 C11orf98E9PRG8 122 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 CDC42EP2O14613 210 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 SERPINI2O75830 405 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 PLGP00747 810 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 IGF2P01344 180 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 ASAH2BP0C7U1 165 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 TMIGD3P0DMS9 266 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 FCGR1AP12314 374 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 EDNRAP25101 427 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 CHRNB4P30926 498 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 CEACAM8P31997 349 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 TIMP3P35625 211 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 CTBP2P56545 445 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 MFSD13AQ14CX5 517 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 RIPPLY2Q5TAB7 128 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 TMEM211Q6ICI0 200 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 PGBD2Q6P3X8 592 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 H1FNTQ75WM6 255 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 ZER1Q7Z7L7 766 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 RNF113BQ8IZP6 322 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 KDM8Q8N371 416 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 CNEP1R1Q8N9A8 125 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 SCAIQ8N9R8 606 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 AQP11Q8NBQ7 271 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 OR10G2Q8NGC3 310 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 STMN2Q93045 179 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 GPA33Q99795 319 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 PKP2Q99959 881 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 PSD2Q9BQI7 771 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 SEMA6AQ9H2E6 1030 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 NTN4Q9HB63 628 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 S100A14Q9HCY8 104 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 MRPL39Q9NYK5 338 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 KLHL9Q9P2J3 617 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 B3GAT1Q9P2W7 334 aa10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 ING1Q9UK53 422 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-210ENST00000528149 MAGED1Q9Y5V3 778 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms