RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ZNF44P15621 663 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 CD70P32970 193 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 LMAN2Q12907 356 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 IRF5Q13568 498 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 CCL14Q16627 93 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 OR10K2Q6IF99 312 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 DCUN1D4Q92564 292 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 MIB2Q96AX9 1013 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 CNN2Q99439 309 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 NRTNQ99748 197 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 MTFP1Q9UDX5 166 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 POLR2AP24928 1970 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 MYADML2A6NDP7 307 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 A6NLC8 198 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 COLCA2A8K830 154 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 NDUFS4O43181 175 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PMS2P2O95744 297 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 CKMP06732 381 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 SFTA3P0C7M3 94 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PRSS3P35030 304 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 BSGP35613 385 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 CD96P40200 585 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 MC3RP41968 323 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 RBM34P42696 430 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 EPHB3P54753 998 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 NKPD1Q17RQ9 610 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 UTP23Q9BRU9 249 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 C20orf24Q9BUV8 137 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 TGIF2Q9GZN2 237 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PLXND1Q9Y4D7 1925 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 MAN2B1O00754 1011 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PIN1P1O15428 100 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 ZNF208O43345 1280 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 GLSO94925 669 aaPredicted RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 CKBP12277 381 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 LAMP2P13473 410 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 PRKAR1BP31321 381 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 POLR2LP62875 67 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 DCDP81605 110 aaKnown RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 RTP2Q5QGT7 225 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 RANBP3LQ86VV4 465 aaPredicted RBP11.47□□□□□ -0.57
TSKU-203ENST00000527881 SLC35F2Q8IXU6 374 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 ZBTB8AQ96BR9 441 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 TMEM41AQ96HV5 264 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 LYSMD1Q96S90 227 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 MICU1Q9BPX6 476 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 SELENOIQ9C0D9 397 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 RHOFQ9HBH0 211 aa11.47□□□□□ -0.57
TSKU-203ENST00000527881 WDR90Q96KV7 1748 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 hCG_1809904A0A1W2PP81 198 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 A0A1W2PR64 198 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 A0A1W2PRV1 198 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.57
TSKU-203ENST00000527881 BHLHE40O14503 412 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 IL9P15248 144 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 PGAM2P15259 253 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 CD80P33681 288 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 OR1D2P34982 312 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 PLA2G7Q13093 441 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 SKP2Q13309 424 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 SSX2Q16385 188 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 ZNF627Q7L945 461 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.57
TSKU-203ENST00000527881 NUP43Q8NFH3 380 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 CMTM3Q96MX0 182 aa11.46□□□□□ -0.57
TSKU-203ENST00000527881 NKX3-1Q99801 234 aaPredicted RBP11.46□□□□□ -0.57
TSKU-203ENST00000527881 SLC5A10A0PJK1 596 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 THY1P04216 161 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 S100A2P29034 98 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 RPL4P36578 427 aaKnown RBP11.46□□□□□ -0.58
TSKU-203ENST00000527881 GPX4P36969 197 aaPredicted RBP11.46□□□□□ -0.58
TSKU-203ENST00000527881 PDX1P52945 283 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 ALKBH1Q13686 389 aaKnown RBP11.46□□□□□ -0.58
TSKU-203ENST00000527881 GRB14Q14449 540 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 ZNF227Q86WZ6 799 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 DOK4Q8TEW6 326 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 MYLIPQ8WY64 445 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 ARHGDIGQ99819 225 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 NRIP2Q9BQI9 281 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 LGR4Q9BXB1 951 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 OR2AG1Q9H205 316 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 CALML5Q9NZT1 146 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 WDR45Q9Y484 360 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 RNF222A6NCQ9 220 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 PSMB5P28074 263 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 PON3Q15166 354 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 INPP5JQ15735 1006 aaPredicted RBP11.46□□□□□ -0.58
TSKU-203ENST00000527881 CLLU1OSQ5K130 101 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 FAM46CQ5VWP2 391 aa11.46□□□□□ -0.58
TSKU-203ENST00000527881 DMBX1Q8NFW5 382 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms