RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PIGXQ8TBF5 258 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 RSRC1Q96IZ7 334 aaKnown RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 FEVQ99581 238 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 NIPSNAP1Q9BPW8 284 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 PRRG4Q9BZD6 226 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 OPN3Q9H1Y3 402 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 REEP1Q9H902 201 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 REV1Q9UBZ9 1251 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 PRSS50Q9UI38 385 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 BLOC1S5-TXNDC5H3BN57 136 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 PDLIM1O00151 329 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 OR10H3O60404 316 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 CCNB2O95067 398 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 F13BP05160 661 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ADORA3P0DMS8 318 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 CD8BP10966 210 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 POU2F1P14859 743 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 BMP5P22003 454 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 FPR3P25089 353 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 GRNP28799 593 aaKnown RBP9.53□□□□□ -0.88
NEDD8-205ENST00000527046 CHRNB4P30926 498 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
NEDD8-205ENST00000527046 OR3A2P47893 321 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 SELENOPP49908 381 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 SIRPAP78324 504 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ELF3P78545 371 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-205ENST00000527046 PUDPQ08623 228 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 FBXL19-AS1Q494R0 122 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ZBED5Q49AG3 693 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ARMC4Q5T2S8 1044 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 PPP4R4Q6NUP7 873 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 FAHD1Q6P587 224 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 KLHL17Q6TDP4 642 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 CD300LDQ6UXZ3 194 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 TMEM123Q8N131 208 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 GABRG1Q8N1C3 465 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 C10orf53Q8N6V4 93 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 OR6K3Q8NGY3 331 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 GNPDA2Q8TDQ7 276 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 GIPC3Q8TF64 312 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 SSC4DQ8WTU2 575 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 NMD3Q96D46 503 aaKnown RBP9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ZHX1-C8orf76Q96EF9 292 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ASPNQ9BXN1 380 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 DGCR6LQ9BY27 220 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 PLA2G12AQ9BZM1 189 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 SEMA6AQ9H2E6 1030 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-205ENST00000527046 MED29Q9NX70 200 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
NEDD8-205ENST00000527046 ARRDC5A6NEK1 342 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 UNC119BA6NIH7 251 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 MCIDASD6RGH6 385 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 C11orf98E9PRG8 122 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 AGFG2O95081 481 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 IFNGR1P15260 489 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 FASP25445 335 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SLC9A3P48764 834 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 DAPP51397 102 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SMSP52788 366 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 PER3P56645 1201 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 CLDN17P56750 224 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 TSPAN31Q12999 210 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 GK3PQ14409 553 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 HIST3H3Q16695 136 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 ANKDD1AQ495B1 522 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 TSPO2Q5TGU0 170 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 MTFR2Q6P444 385 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SHQ1Q6PI26 577 aaKnown RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 GALNT5Q7Z7M9 940 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 OAFQ86UD1 273 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 GPAT4Q86UL3 456 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 IGFN1Q86VF2 1251 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 CNEP1R1Q8N9A8 125 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 AQP11Q8NBQ7 271 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 OR10G2Q8NGC3 310 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 OR8D4Q8NGM9 314 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 ASB5Q8WWX0 329 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF837Q96EG3 531 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 NRBF2Q96F24 287 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 CENPNQ96H22 339 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 OR2M2Q96R28 347 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 GPX7Q96SL4 187 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 DDOQ99489 341 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 EMC6Q9BV81 110 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 C12orf49Q9H741 205 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 NRIP3Q9NQ35 241 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SLC7A10Q9NS82 523 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 IL20Q9NYY1 176 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 PDP1Q9P0J1 537 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 TMEFF2Q9UIK5 374 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms