RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CCNIQ14094 377 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 GSTA3Q16772 222 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 OGFOD2Q6N063 350 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 DEF8Q6ZN54 512 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 MDP1Q86V88 176 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 TMEM123Q8N131 208 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 CADM2Q8N3J6 435 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 LINC01356Q8N9X3 169 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 OR52P1PQ8NH57 321 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 VPS33AQ96AX1 596 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 KTI12Q96EK9 354 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-201ENST00000526271 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 OR52B2Q96RD2 323 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 TPK1Q9H3S4 243 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 AIG1Q9NVV5 245 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 B3GNT2Q9NY97 397 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 MYEF2Q9P2K5 600 aaKnown RBP12.3□□□□□ -0.44
CPSF1-201ENST00000526271 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 TGP01266 2768 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 CMYA5Q8N3K9 4069 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 A8MVM7 634 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 KCNAB3O43448 404 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-201ENST00000526271 AVPP01185 164 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 NUDT7P0C024 238 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 TFPTP0C1Z6 253 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 TROVE2P10155 538 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPSF1-201ENST00000526271 IL7RP16871 459 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 EGR1P18146 543 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 LBPP18428 481 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 CXCR1P25024 350 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 COL8A2P25067 703 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 CLDN17P56750 224 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 ADRM1Q16186 407 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 WBP2NLQ6ICG8 309 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 RINLQ6ZS11 566 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 C10orf111Q8N326 155 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 OR4F15Q8NGB8 312 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 HPS1Q92902 700 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 YIPF5Q969M3 257 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 EBF4Q9BQW3 602 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 MRPL37Q9BZE1 423 aaKnown RBP12.29□□□□□ -0.44
CPSF1-201ENST00000526271 KLHL14Q9P2G3 628 aa12.29□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF443Q9Y2A4 671 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-201ENST00000526271 NCR1O76036 304 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 HPXP02790 462 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 ADRA2AP08913 450 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 NR2F1P10589 423 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 HLA-DOBP13765 273 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 NPR2P20594 1047 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 HNF1AP20823 631 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 HTR2AP28223 471 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 CHN2P52757 468 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 DVL1P1P54792 670 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-201ENST00000526271 UBE2NP61088 152 aaKnown RBP12.28□□□□□ -0.44
CPSF1-201ENST00000526271 HPCAP84074 193 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 RNF220Q5VTB9 566 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 KRT80Q6KB66 452 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF621Q6ZSS3 439 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 UBASH3BQ8TF42 649 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 NEU4Q8WWR8 484 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-201ENST00000526271 THOC1Q96FV9 657 aaKnown RBP12.28□□□□□ -0.44
CPSF1-201ENST00000526271 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 PANX1Q96RD7 426 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 WFDC6Q9BQY6 131 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 RAB1BQ9H0U4 201 aa12.28□□□□□ -0.44
CPSF1-201ENST00000526271 MS4A18H0YCH9 400 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 ZNF35P13682 527 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 HOXB9P17482 250 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-201ENST00000526271 RPS5P46782 204 aaKnown RBP12.27□□□□□ -0.45
CPSF1-201ENST00000526271 ARFIP2P53365 341 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.45
CPSF1-201ENST00000526271 SNTB2Q13425 540 aaKnown RBP12.27□□□□□ -0.45
CPSF1-201ENST00000526271 DPY19L1Q2PZI1 675 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 MS4A18Q3C1V0 323 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 PIGWQ7Z7B1 504 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 CLDND2Q8NHS1 167 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 OR52E6Q96RD3 313 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 TCF7L2Q9NQB0 619 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 RCE1Q9Y256 329 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 RASD1Q9Y272 281 aa12.27□□□□□ -0.45
CPSF1-201ENST00000526271 A0A0G2JND7 137 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms