RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 A0A1W2PQ72 361 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 GABRR3A8MPY1 467 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 RAB29O14966 203 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SEMG1P04279 462 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SRMP19623 302 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 TBPP20226 339 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SHMT2P34897 504 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 HSD17B2P37059 387 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 NAA10P41227 235 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-211ENST00000525970 KIR2DS4P43632 304 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 GSSP48637 474 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 NOVP48745 357 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 CCNHP51946 323 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-211ENST00000525970 DAOAP59103 153 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 GPX6P59796 221 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF763Q0D2J5 394 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SELENBP1Q13228 472 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 C22orf42Q6IC83 251 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 C1orf94Q6P1W5 598 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 FRA10AC1Q70Z53 315 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 MICU2Q8IYU8 434 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 OR4A4PQ8NGN8 299 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 OR1S2Q8NGQ3 325 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 DTX3LQ8TDB6 740 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 GPX8Q8TED1 209 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 AGAP11Q8TF27 550 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SGK3Q96BR1 496 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 FGGYQ96C11 551 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 OR8B4Q96RC9 309 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 ATP5SQ99766 215 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SH3GL1Q99961 368 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 TMEM59Q9BXS4 323 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SELENOIQ9C0D9 397 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 CYP3A43Q9HB55 503 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 TMEM165Q9HC07 324 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 AHSPQ9NZD4 102 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 PTTG3PQ9NZH4 202 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 DCDC2Q9UHG0 476 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 UBQLN1Q9UMX0 589 aaKnown RBP3.4□□□□□ -1.87
CSDE1-211ENST00000525970 SMAD5-AS1Q9Y6J3 95 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 RAI1Q7Z5J4 1906 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 AKNAQ7Z591 1439 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 KCNE1BA0A087WTH5 132 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 TEX46H3BTG2 121 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 CCL21O00585 134 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 GOSR2O14653 212 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 TRDMT1O14717 391 aaKnown RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 IGHV3-48P01763 117 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 C2P06681 752 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 RRM2P31350 389 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 RGRP47804 291 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 TIMM50Q3ZCQ8 353 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 SAMD4BQ5PRF9 694 aaKnown RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 C9orf135Q5VTT2 229 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 PLCXD3Q63HM9 321 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 OLFML2AQ68BL7 652 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 TTC19Q6DKK2 380 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF836Q6ZNA1 936 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 SLC16A14Q7RTX9 510 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 FGF14Q92915 247 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 ITCHQ96J02 903 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 SORT1Q99523 831 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF184Q99676 751 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 PAXXQ9BUH6 204 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF702PQ9H963 129 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 UGT1A10Q9HAW8 530 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 FGF20Q9NP95 211 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 APOBEC3BQ9UH17 382 aaKnown RBP3.39□□□□□ -1.87
CSDE1-211ENST00000525970 KIF25Q9UIL4 384 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 FLVCR1Q9Y5Y0 555 aa3.39□□□□□ -1.87
CSDE1-211ENST00000525970 KBTBD11-OT1A0A1B0GTJ5 212 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 SIRPB1O00241 398 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 WWP2O00308 870 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 LYPLA1O75608 230 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 ANXA5P08758 320 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 OR8U8P0C7N1 319 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 PRKACAP17612 351 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 DCKP27707 260 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 GTF2E2P29084 291 aaKnown RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 MDH2P40926 338 aaKnown RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 UQCRFS1P47985 274 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 TMED10P49755 219 aaKnown RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 KLK7P49862 253 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 ETV1P50549 477 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 GPM6AP51674 278 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 CARD18P57730 90 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 RAB11AP62491 216 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 BCL2L1Q07817 233 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 RAB11BQ15907 218 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 Q1RN00 199 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 RNLSQ5VYX0 342 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 REEP3Q6NUK4 255 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 TRIM40Q6P9F5 258 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 PAMR1Q6UXH9 720 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 APOBEC3FQ8IUX4 373 aaKnown RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 IQCKQ8N0W5 287 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 LYG1Q8N1E2 194 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 CCDC71LQ8N9Z2 235 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 FAM222BQ8WU58 562 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 PIBF1Q8WXW3 757 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms