RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 LINC00479Q96M42 142 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 FOPNLQ96NB1 174 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MUS81Q96NY9 551 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 PSKH2Q96QS6 385 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 LGMNQ99538 433 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 NPAS2Q99743 824 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 OMDQ99983 421 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 SPXQ9BT56 116 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 COPS4Q9BT78 406 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MED18Q9BUE0 208 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 CDCA4Q9BXL8 241 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 DGCR6LQ9BY27 220 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 PRRG4Q9BZD6 226 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 DCSTAMPQ9H295 470 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 TPK1Q9H3S4 243 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 ELOVL6Q9H5J4 265 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MARCH7Q9H992 704 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 NANOGQ9H9S0 305 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 C12orf10Q9HB07 376 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 NEK6Q9HC98 313 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 ISYNA1Q9NPH2 558 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 ACOT13Q9NPJ3 140 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 CHRAC1Q9NRG0 131 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 DDX28Q9NUL7 540 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 DCAF13Q9NV06 445 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 DNAJC11Q9NVH1 559 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RBM22Q9NW64 420 aaKnown RBP eCLIP2.29□□□□□ -2.047e-6■■■■□ 24.6
ECHDC1-218ENST00000525745 FKBP14Q9NWM8 211 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 CLN6Q9NWW5 311 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 C1orf109Q9NX04 203 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 TAS2R9Q9NYW1 312 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MAT2BQ9NZL9 334 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MBD2Q9UBB5 411 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 OPTCQ9UBM4 332 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 SPASTQ9UBP0 616 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 CACNG5Q9UF02 275 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 CYTH4Q9UIA0 394 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 PCTPQ9UKL6 214 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 IKZF3Q9UKT9 509 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 SNX7Q9UNH6 387 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 ING4Q9UNL4 249 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RNF6Q9Y252 685 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 ANGPT4Q9Y264 503 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RPH3AQ9Y2J0 694 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RNF11Q9Y3C5 154 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RPL36Q9Y3U8 105 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 SAMHD1Q9Y3Z3 626 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 OARD1Q9Y530 152 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 MYH11P35749 1972 aa2.29□□□□□ -2.04
ECHDC1-218ENST00000525745 RALGAPA2Q2PPJ7 1873 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 PHIPQ8WWQ0 1821 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 COL4A1P02462 1669 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 IGLV3-10A0A075B6K4 115 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 LOC285095A0A1B0GVY8 99 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 ATP6AP2A0A1C7CYW4 349 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 MEIOCA2RUB1 952 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 MBLAC1A4D2B0 266 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 C5orf52A6NGY3 159 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 ANKDD1BA6NHY2 528 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 KRBOX1C9JBD0 128 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 F5H5T6 163 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 H0YIG0 161 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 BOLA2-SMG1P6H3BVE0 249 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 DFFAO00273 331 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CXCR6O00574 342 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CLDN4O14493 209 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 RFXANKO14593 260 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 MYL12BO14950 172 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 LRRTM2O43300 516 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 TPST1O60507 370 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CLDN11O75508 207 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 SORBS2O94875 1100 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CDK14O94921 469 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CCNB2O95067 398 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 SIX3O95343 332 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 WISP3O95389 354 aaPredicted RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CLDN9O95484 217 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 SNAP29O95721 258 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 PTBP3O95758 552 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CRYZL1O95825 349 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 TSPAN12O95859 305 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 SLC16A8O95907 504 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 DHFRP00374 187 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 JCHAINP01591 159 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 IGLV3-25P01717 112 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 C1QBP02746 253 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 RPN2P04844 631 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 LGALS2P05162 132 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CDK1P06493 297 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 IL7P13232 177 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 DARSP14868 501 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CD1DP15813 335 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 DPEP1P16444 411 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 CD36P16671 472 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 ATF6P18850 670 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
ECHDC1-218ENST00000525745 ADORA2BP29275 332 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms