RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 RPP21Q9H633 154 aaKnown RBP2.29□□□□□ -2.04
COPB1-203ENST00000525214 TM9SF3Q9HD45 589 aa2.29□□□□□ -2.04
COPB1-203ENST00000525214 CTPS2Q9NRF8 586 aa2.29□□□□□ -2.04
COPB1-203ENST00000525214 GLRX2Q9NS18 164 aa2.29□□□□□ -2.04
COPB1-203ENST00000525214 ODF2LQ9ULJ1 636 aa2.29□□□□□ -2.04
COPB1-203ENST00000525214 RPL36Q9Y3U8 105 aaKnown RBP2.29□□□□□ -2.04
COPB1-203ENST00000525214 NFASCO94856 1347 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 IGHV5-51A0A0C4DH38 117 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 IGHV3-66A0A0C4DH42 116 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 PFKFB2O60825 505 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 SEC22BO75396 215 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 ADRA2AP08913 450 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 HTR2AP28223 471 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 MAP3K8P41279 467 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 TDO2P48775 406 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 ACVR1Q04771 509 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 CARD16Q5EG05 197 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 FBXW9Q5XUX1 488 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 OR52E8Q6IFG1 317 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 CNSTQ6PJW8 725 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 CES3Q6UWW8 571 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 LRP11Q86VZ4 500 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 TEX9Q8N6V9 391 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 LINC00304Q8N9R0 145 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 CNNM3Q8NE01 707 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 SPRYD4Q8WW59 207 aaPredicted RBP2.28□□□□□ -2.04
COPB1-203ENST00000525214 TBC1D31Q96DN5 1066 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 AURKBQ96GD4 344 aaPredicted RBP2.28□□□□□ -2.04
COPB1-203ENST00000525214 C4orf36Q96KX1 117 aa2.28□□□□□ -2.04
COPB1-203ENST00000525214 SCGB2A1O75556 95 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 TM7SF2O76062 418 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 SRP72O76094 671 aaKnown RBP2.27□□□□□ -2.05
COPB1-203ENST00000525214 IGKV1D-16P01601 117 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 BGLAPP02818 100 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 ALDOBP05062 364 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 MMP11P24347 488 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 DDOSTP39656 456 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 MEF2BQ02080 365 aaPredicted RBP2.27□□□□□ -2.05
COPB1-203ENST00000525214 VAX1Q5SQQ9 334 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 RAET1EQ8TD07 263 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 FGF14Q92915 247 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 SH3YL1Q96HL8 342 aaPredicted RBP2.27□□□□□ -2.05
COPB1-203ENST00000525214 FOXC2Q99958 501 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 ECSITQ9BQ95 431 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 EDEM2Q9BV94 578 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 RBKSQ9H477 322 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 ZNF355PQ9NSJ1 428 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 KCNIP1Q9NZI2 227 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 XCL2Q9UBD3 114 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 COPS3Q9UNS2 423 aa2.27□□□□□ -2.05
COPB1-203ENST00000525214 YEATS2Q9ULM3 1422 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 GKN3PP0CG01 181 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 PNMTP11086 282 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 BPIFB3P59826 476 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 TNFRSF17Q02223 184 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 VGLL4Q14135 290 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 SLC15A2Q16348 729 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 PGAP1Q75T13 922 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 OSR2Q8N2R0 312 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 NAP1L5Q96NT1 182 aaPredicted RBP2.26□□□□□ -2.05
COPB1-203ENST00000525214 WFIKKN1Q96NZ8 548 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 CHAC1Q9BUX1 264 aa2.26□□□□□ -2.05
COPB1-203ENST00000525214 RANBP3Q9H6Z4 567 aaPredicted RBP2.26□□□□□ -2.05
COPB1-203ENST00000525214 MRPS33Q9Y291 106 aaKnown RBP2.26□□□□□ -2.05
COPB1-203ENST00000525214 SHANK1Q9Y566 2161 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 A0A1W2PP18 115 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 LRP5LA4QPB2 252 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 INS-IGF2F8WCM5 200 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 CPLX1O14810 134 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 B3GALNT1O75752 331 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 LINC00869P0C866 280 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 DESP17661 470 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 ARF4P18085 180 aaPredicted RBP2.25□□□□□ -2.05
COPB1-203ENST00000525214 IL10P22301 178 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 GSSP48637 474 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 GMFBP60983 142 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 SYCNQ0VAF6 134 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 ASPHQ12797 758 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 TMEM41BQ5BJD5 291 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
COPB1-203ENST00000525214 KCNIP4Q6PIL6 250 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 AFTPHQ6ULP2 937 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 HSDL2Q6YN16 418 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 ZNF619Q8N2I2 560 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 ARL6IP6Q8N6S5 226 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 RGP1Q92546 391 aaPredicted RBP2.25□□□□□ -2.05
COPB1-203ENST00000525214 PELI1Q96FA3 418 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 PDXPQ96GD0 296 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 AMDHD1Q96NU7 426 aa2.25□□□□□ -2.05
COPB1-203ENST00000525214 HOOK1Q9UJC3 728 aaKnown RBP2.25□□□□□ -2.05
COPB1-203ENST00000525214 SF3B1O75533 1304 aaKnown RBP eCLIP2.24□□□□□ -2.05
COPB1-203ENST00000525214 BTN3A3O00478 584 aa2.24□□□□□ -2.05
COPB1-203ENST00000525214 RRP8O43159 456 aaKnown RBP2.24□□□□□ -2.05
COPB1-203ENST00000525214 VAMP5O95183 116 aa2.24□□□□□ -2.05
COPB1-203ENST00000525214 CSF3P09919 207 aa2.24□□□□□ -2.05
COPB1-203ENST00000525214 MAPK3P27361 379 aaPredicted RBP2.24□□□□□ -2.05
COPB1-203ENST00000525214 GYG1P46976 350 aa2.24□□□□□ -2.05
COPB1-203ENST00000525214 PDIA2Q13087 525 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms