RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 INPP5EQ9NRR6 644 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 DEC1Q9P2X7 70 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 OR10H1Q9Y4A9 318 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 HEATR5AQ86XA9 2040 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 DCTN6O00399 190 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 BET1O15155 118 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 DDX6P26196 483 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 RAP2BP61225 183 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 MAT1AQ00266 395 aaKnown RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 GK2Q14410 553 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 KIRREL2Q6UWL6 708 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 ADAMTSL4Q6UY14 1074 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 OVCH1Q7RTY7 1134 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 OR6V1Q8N148 313 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 FAM71CQ8NEG0 241 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 OR2L8Q8NGY9 312 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 LCN9Q8WX39 176 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 C7orf50Q9BRJ6 194 aaKnown RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 MFFQ9GZY8 342 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TCF7L1Q9HCS4 588 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 MRPS23Q9Y3D9 190 aaKnown RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 NDUFB6O95139 128 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 HSD17B2P37059 387 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TNFRSF17Q02223 184 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 FBXO42Q6P3S6 717 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 LRRC69Q6ZNQ3 347 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TTLQ8NG68 377 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 NR4A3Q92570 626 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 SLC38A3Q99624 504 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 PITHD1Q9GZP4 211 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 IL23AQ9NPF7 189 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 F5P12259 2224 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 M0QYG6 137 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 IGKV1D-16P01601 117 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 CD3DP04234 171 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 F13BP05160 661 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 DBIP07108 87 aaKnown RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 FGF2P09038 288 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 OR2T7P0C7T2 308 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 GTF2F2P13984 249 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 SPI1P17947 270 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 SLC6A6P31641 620 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 ART1P52961 327 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 ACTC1P68032 377 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 ACTA1P68133 377 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM52BQ4KMG9 183 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 PDZD9Q8IXQ8 264 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TMIEQ8NEW7 156 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 OR2T27Q8NH04 317 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 ATOH1Q92858 354 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 FGF13Q92913 245 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 RNF166Q96A37 237 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 LMF1Q96S06 567 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 NPAS1Q99742 590 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D29Q9UFV1 150 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 CHRNA9Q9UGM1 479 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 IKZF2Q9UKS7 526 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 DTX4Q9Y2E6 619 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 EML5Q05BV3 1969 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TRAV18A0A075B6X5 111 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 F5H5P2 479 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 H0Y8X5 98 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-202ENST00000524773 OR2A4O95047 310 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 IFNGP01579 166 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 PPP3CBP16298 524 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 SQSTM1Q13501 440 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 LEG1Q6P5S2 330 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM205Q6UW68 189 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 HDDC2Q7Z4H3 204 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 MFSD9Q8NBP5 474 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 OR2A7Q96R45 310 aa12.03□□□□□ -0.48
CAPN1-202ENST00000524773 A0A0B4J2E0 115 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 A0A1B0GX12 115 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CTDSPLO15194 276 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 PRAF2O60831 178 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 FGF19O95750 216 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CEACAM5P06731 702 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LBX1P52954 281 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LTBQ06643 244 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LIPNQ5VXI9 398 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LRRN1Q6UXK5 716 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 OVCH2Q7RTZ1 564 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 SPICQ8N5J4 248 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 OR2AK2Q8NG84 335 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 OR10K1Q8NGX5 313 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms