RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 ULK3Q6PHR2 472 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 DHRS4L2Q6PKH6 230 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 HPS1Q92902 700 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 SLC47A1Q96FL8 570 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 PTDSS2Q9BVG9 487 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 PAIP1Q9H074 479 aaKnown RBP10.29□□□□□ -0.76
SPARC-206ENST00000524277 GPR35Q9HC97 309 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 USP22Q9UPT9 525 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 CORO2BQ9UQ03 480 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 GMEB1Q9Y692 573 aa10.29□□□□□ -0.76
SPARC-206ENST00000524277 A0A096LPE4 126 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 A0A1W2PPZ6 126 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 ZNF99A8MXY4 864 aaPredicted RBP10.28□□□□□ -0.76
SPARC-206ENST00000524277 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
SPARC-206ENST00000524277 ZNF23P17027 643 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 GIFP27352 417 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 EVX1P49640 407 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
SPARC-206ENST00000524277 SQLEQ14534 574 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 GTDC1Q4AE62 458 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 ALG10BQ5I7T1 473 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 REEP3Q6NUK4 255 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 EPGNQ6UW88 154 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 SCAIQ8N9R8 606 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 MGARPQ8TDB4 240 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 VPS33AQ96AX1 596 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 KTI12Q96EK9 354 aaPredicted RBP10.28□□□□□ -0.76
SPARC-206ENST00000524277 FOXN4Q96NZ1 517 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 OR52B2Q96RD2 323 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 ZNF607Q96SK3 696 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 PRR14Q9BWN1 585 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 TMEM27Q9HBJ8 222 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 B3GAT2Q9NPZ5 323 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 TESQ9UGI8 421 aaKnown RBP10.28□□□□□ -0.76
SPARC-206ENST00000524277 FBXL3Q9UKT7 428 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 SPEF1Q9Y4P9 236 aa10.28□□□□□ -0.76
SPARC-206ENST00000524277 CUBNO60494 3623 aa10.27□□□□□ -0.76
SPARC-206ENST00000524277 A0A1B0GWA3 101 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 M0R082 166 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 NR5A2O00482 541 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 POLR3GO15318 223 aaPredicted RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 ZNF500O60304 480 aaPredicted RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 ENTPD5O75356 428 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 ERLIN1O75477 346 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 SERPINB7O75635 380 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 LY6HO94772 140 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 STAMBPO95630 424 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 NUDT7P0C024 238 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 ARAFP10398 606 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 GRPRP30550 384 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CALCRP30988 508 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CHN2P52757 468 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 MAGOHP61326 146 aaKnown RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 NCALDP61601 193 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 LGALS3BPQ08380 585 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CARTPTQ16568 116 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CEACAM16Q2WEN9 425 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 LRIF1Q5T3J3 769 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 GCNT6Q5T4J0 391 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 ZNF627Q7L945 461 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 LINGO2Q7L985 606 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 UEVLDQ8IX04 471 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 KDM8Q8N371 416 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 OR9I1Q8NGQ6 314 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 ZNF417Q8TAU3 575 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 TAAR8Q969N4 342 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 TLCD1Q96CP7 247 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 MSI2Q96DH6 328 aaKnown RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 SLC41A3Q96GZ6 507 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 OR2M2Q96R28 347 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 ZNF587Q96SQ5 575 aaPredicted RBP10.27□□□□□ -0.77
SPARC-206ENST00000524277 DOK1Q99704 481 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 NELFAQ9H3P2 528 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 TMEM38AQ9H6F2 299 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CRLF2Q9HC73 371 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 B3GAT1Q9P2W7 334 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 SLC13A4Q9UKG4 626 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
SPARC-206ENST00000524277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.77
SPARC-206ENST00000524277 A0A087WUJ7 227 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 IGHV2OR16-5A0A0B4J2B6 119 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 ZNF726A6NNF4 738 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 EVPLLA8MZ36 301 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 hCG_2039718K7EN88 272 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 TGFAP01135 160 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 C8BP07358 591 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 VIMP08670 466 aaKnown RBP10.26□□□□□ -0.77
SPARC-206ENST00000524277 TACSTD2P09758 323 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 DAOP14920 347 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 NQO1P15559 274 aaKnown RBP10.26□□□□□ -0.77
SPARC-206ENST00000524277 HOXB9P17482 250 aaPredicted RBP10.26□□□□□ -0.77
SPARC-206ENST00000524277 PCMT1P22061 227 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 SLC6A2P23975 617 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 IGFBP5P24593 272 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 THBS4P35443 961 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 HOXC5Q00444 222 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 CDK6Q00534 326 aa10.26□□□□□ -0.77
SPARC-206ENST00000524277 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms