RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 GTF3AQ92664 365 aaKnown RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 COQ8BQ96D53 544 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 PPP3R2Q96LZ3 170 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 C3orf30Q96M34 536 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 TSPAN32Q96QS1 320 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 GAL3ST1Q99999 423 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 EXOSC3Q9NQT5 275 aaKnown RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 RLIMQ9NVW2 624 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 PSMC3IPQ9P2W1 217 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF69Q9UC07 566 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 OPN4Q9UHM6 478 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 PRAMEF27A3QJZ7 478 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 PATE4P0C8F1 98 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 G6PDP11413 515 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 PRPS1L1P21108 318 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 PAX7P23759 505 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 GIPRP48546 466 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 P2RY4P51582 365 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 NAA20P61599 178 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 ETF1P62495 437 aaKnown RBP9.93□□□□□ -0.82
SDCBP-211ENST00000523441 EPS8Q12929 822 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 GSG1Q2KHT4 349 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 CCDC153Q494R4 210 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 C6orf136Q5SQH8 315 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 MRPL2Q5T653 305 aaKnown RBP9.93□□□□□ -0.82
SDCBP-211ENST00000523441 C1orf140Q5VVS0 124 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 SPATC1Q76KD6 591 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 TREML1Q86YW5 311 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 FAM169BQ8N8A8 192 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 IL17RDQ8NFM7 739 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 PNPT1Q8TCS8 783 aaKnown RBP9.93□□□□□ -0.82
SDCBP-211ENST00000523441 TUBGCP3Q96CW5 907 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 BOD1Q96IK1 185 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 LINC00470Q9BZP3 86 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 MOV10Q9HCE1 1003 aaKnown RBP9.93□□□□□ -0.82
SDCBP-211ENST00000523441 MID2Q9UJV3 735 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 RASD1Q9Y272 281 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 WIPI2Q9Y4P8 454 aa9.93□□□□□ -0.82
SDCBP-211ENST00000523441 SOX21Q9Y651 276 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-211ENST00000523441 A8MVM7 634 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 CLDN25C9JDP6 229 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 J3QLI3 93 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 COPEO14579 308 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 DEAF1O75398 565 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 LYPLA1O75608 230 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 SERPINI2O75830 405 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 AHSA1O95433 338 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 RAB36O95755 333 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 IGHV2-5P01817 119 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 PNMTP11086 282 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 CCL2P13500 99 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 B4GALT1P15291 398 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 GLRXP35754 106 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 RBMXP38159 391 aaKnown RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 EVX1P49640 407 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 ERVS71-1P61550 626 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 IL13RA1P78552 427 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 RAB39AQ14964 217 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF813Q6ZN06 617 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 USP51Q70EK9 711 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 VRK2Q86Y07 508 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 C4orf33Q8N1A6 199 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 MIER2Q8N344 545 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 NATD1Q8N6N6 113 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 SNX33Q8WV41 574 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 DVL3Q92997 716 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 SLC25A28Q96A46 364 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 LRRC58Q96CX6 371 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 C1orf147Q96MC9 270 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF48Q96MX3 618 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF317Q96PQ6 595 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 EMC6Q9BV81 110 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 DECR2Q9NUI1 292 aa9.92□□□□□ -0.82
SDCBP-211ENST00000523441 PDP1Q9P0J1 537 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-211ENST00000523441 IGHV1-69-2A0A0G2JMI3 117 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF99A8MXY4 864 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 RIPK2O43353 540 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ALX3O95076 343 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 VAMP5O95183 116 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 AGR2O95994 175 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 LCKP06239 509 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF35P13682 527 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 PRG2P13727 222 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 UQCRC2P22695 453 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ECHS1P30084 290 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 LSP1P33241 339 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 CCT5P48643 541 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 COPZ1P61923 177 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 CKAP4Q07065 602 aaKnown RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 GNA13Q14344 377 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 PCLAFQ15004 111 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 UGT3A2Q3SY77 523 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 RGS7BPQ6MZT1 257 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 C17orf107Q6ZR85 190 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms