RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 RAB1BQ9H0U4 201 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 TPK1Q9H3S4 243 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 TRIM45Q9H8W5 580 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 CALHM2Q9HA72 323 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 MEAF6Q9HAF1 191 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 RPS10P5Q9NQ39 176 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 MRPL22Q9NWU5 206 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 MTCH1Q9NZJ7 389 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 ARMCX1Q9P291 453 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 CYB5R1Q9UHQ9 305 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 MGAT4AQ9UM21 535 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 RPH3ALQ9UNE2 315 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 ERGIC3Q9Y282 383 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 NRXN3Q9Y4C0 1643 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 LRRK1Q38SD2 2015 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 NEXMIFQ5QGS0 1516 aa3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 COL5A2P05997 1499 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-238ENST00000523298 RIMS2Q9UQ26 1411 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ABCC4O15439 1325 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 UQCRHLA0A096LP55 91 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 A8MXQ7 604 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 WASH3PC4AMC7 463 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 WWP2O00308 870 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ZNF354AO60765 605 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ZNF253O75346 499 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 IGHV3-9P01782 118 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 MT-ND1P03886 318 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 IFNA6P05013 189 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 UQCRHP07919 91 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ANXA4P09525 319 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ALPIP09923 528 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 HIST1H2AGP0C0S8 130 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 OR4E1P0C645 316 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 MCF2P10911 925 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PNMTP11086 282 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 MX1P20591 662 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PAICSP22234 425 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 HTR2AP28223 471 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 GNA11P29992 359 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SPCS3P61009 180 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 RAB4BP61018 213 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ZNF33AQ06730 810 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ZNF33BQ06732 778 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 TSPAN31Q12999 210 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SLAMF1Q13291 335 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PDK2Q15119 407 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 TGFBIQ15582 683 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 UAP1Q16222 522 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 EXOC3L2Q2M3D2 409 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ACTBL2Q562R1 376 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 YIF1BQ5BJH7 314 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 C6orf183Q5T699 404 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 AGAP7PQ5VUJ5 663 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 RAET1LQ5VY80 246 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 VITQ6UXI7 678 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SYT10Q6XYQ8 523 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ASRGL1Q7L266 308 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 RBM45Q8IUH3 476 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 CLVS1Q8IUQ0 354 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ZNF786Q8N393 782 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 C17orf78Q8N4C9 275 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 CERS5Q8N5B7 392 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PQLC3Q8N755 202 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 CYB561A3Q8NBI2 242 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 OR10H4Q8NGA5 316 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 OR13C9Q8NGT0 318 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 DTD1Q8TEA8 209 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 FCGR1BQ92637 280 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 HIST1H2ACQ93077 130 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 CPXM1Q96SM3 734 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 CYP2S1Q96SQ9 504 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 HINT2Q9BX68 163 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 NMNAT2Q9BZQ4 307 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 GOLPH3Q9H4A6 298 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 TMEM231Q9H6L2 316 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ALG9Q9H6U8 611 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 WDR76Q9H967 626 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 YAE1D1Q9NRH1 226 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SAMSN1Q9NSI8 373 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 RDH8Q9NYR8 311 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 ADAM22Q9P0K1 906 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 WARS2Q9UGM6 360 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 GINS2Q9Y248 185 aa3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 SCAF11Q99590 1463 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-238ENST00000523298 PTPRTO14522 1441 aa3.53□□□□□ -1.85
CTNNA1-238ENST00000523298 NPHP4O75161 1426 aaPredicted RBP3.53□□□□□ -1.85
CTNNA1-238ENST00000523298 ANKRD30BQ9BXX2 1392 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 AFF2P51816 1311 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 A0A0A6YYH2 397 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 ZNF840PA6NDX5 716 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 TUBAL3A6NHL2 446 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 A6NJ64 397 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 RNF212BA8MTL3 300 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 A8MUI8 341 aa3.52□□□□□ -1.85
CTNNA1-238ENST00000523298 A8MX80 341 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms