RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RCE1Q9Y256 329 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 ZANQ9Y493 2812 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 LOC102725191A0A1B0GVB3 256 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 OR6C65A6NJZ3 312 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 CPSF4LA6NMK7 179 aaKnown RBP16.31■□□□□ 0.2
SPIDR-220ENST00000522900 RNF223E7ERA6 249 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 ATP6V1G2-DDX39BF2Z307 99 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 FXYD1O00168 92 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 C8BP07358 591 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 TROVE2P10155 538 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPIDR-220ENST00000522900 PCGF2P35227 344 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 ARFIP2P53365 341 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 ARF1P84077 181 aaKnown RBP16.31■□□□□ 0.2
SPIDR-220ENST00000522900 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 TRMT5Q32P41 509 aaKnown RBP16.31■□□□□ 0.2
SPIDR-220ENST00000522900 KRTAP21-3Q3LHN1 58 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 ENTPD8Q5MY95 495 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 PHYHD1Q5SRE7 291 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 KLHL24Q6TFL4 600 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 NHLRC1Q6VVB1 395 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 WDR88Q6ZMY6 472 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 OR6S1Q8NH40 331 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 HTRA1Q92743 480 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 TXNDC15Q96J42 360 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 OR2M2Q96R28 347 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 EMC6Q9BV81 110 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 CACNG6Q9BXT2 260 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 EVA1AQ9H8M9 152 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 SAR1AQ9NR31 198 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 CBLN4Q9NTU7 201 aa16.31■□□□□ 0.2
SPIDR-220ENST00000522900 RPL36A-HNRNPH2H7BZ11 118 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 FMO6PO60774 539 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 SLC43A1O75387 559 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
SPIDR-220ENST00000522900 GUCY1A3Q02108 690 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 PMS2P3Q13401 168 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 CYLC2Q14093 348 aaPredicted RBP16.3■□□□□ 0.2
SPIDR-220ENST00000522900 VMACQ2NL98 169 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 CARD17Q5XLA6 110 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 ANKRD16Q6P6B7 361 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 ZNF613Q6PF04 617 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 DNM1P46Q6ZS02 220 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 PATL1Q86TB9 770 aaKnown RBP16.3■□□□□ 0.2
SPIDR-220ENST00000522900 TMEM123Q8N131 208 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 FBXL14Q8N1E6 418 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 MUC15Q8N387 334 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 C10orf53Q8N6V4 93 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 ADPRHL1Q8NDY3 354 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 LRRC58Q96CX6 371 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 EPYCQ99645 322 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 TMEM43Q9BTV4 400 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 FKRPQ9H9S5 495 aa16.3■□□□□ 0.2
SPIDR-220ENST00000522900 LOC100653049A0A140TA62 436 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 SSX4O60224 188 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 KRT34O76011 436 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 NQO1P15559 274 aaKnown RBP16.29■□□□□ 0.2
SPIDR-220ENST00000522900 UBE2NP61088 152 aaKnown RBP16.29■□□□□ 0.2
SPIDR-220ENST00000522900 ETFDHQ16134 617 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 CEACAM16Q2WEN9 425 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 SWT1Q5T5J6 900 aaKnown RBP16.29■□□□□ 0.2
SPIDR-220ENST00000522900 C1QTNF12Q5T7M4 302 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 CALHM3Q86XJ0 350 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 SLC30A8Q8IWU4 369 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 UEVLDQ8IX04 471 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 GPR137CQ8N3F9 429 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
SPIDR-220ENST00000522900 SLC26A7Q8TE54 656 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 ASPNQ9BXN1 380 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 REG4Q9BYZ8 158 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 SEC61A2Q9H9S3 476 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 CRLF2Q9HC73 371 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 OBP2BQ9NPH6 170 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 MED29Q9NX70 200 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 CORINQ9Y5Q5 1042 aa16.29■□□□□ 0.2
SPIDR-220ENST00000522900 ARPC4-TTLL3A0A0A6YYG9 625 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 M0R3G1 203 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 PLPP3O14495 311 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 MRASO14807 208 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 CHP2O43745 196 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 POU3F1Q03052 451 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-220ENST00000522900 KRTAP1-1Q07627 177 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 MFSD13AQ14CX5 517 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 MMEL1Q495T6 779 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 ZNF544Q6NX49 715 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 CCDC80Q76M96 950 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 SNX32Q86XE0 403 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 SCAIQ8N9R8 606 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 ADAMTS16Q8TE57 1224 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 SLC38A2Q96QD8 506 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 MRPL39Q9NYK5 338 aaKnown RBP16.28■□□□□ 0.2
SPIDR-220ENST00000522900 SLC7A7Q9UM01 511 aa16.28■□□□□ 0.2
SPIDR-220ENST00000522900 SLC35F4A4IF30 521 aa16.27■□□□□ 0.2
SPIDR-220ENST00000522900 ZNF503-AS2A6NEH8 195 aa16.27■□□□□ 0.2
SPIDR-220ENST00000522900 SEC14L2O76054 403 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms