RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 NSA2O95478 260 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 SEC24AO95486 1093 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 GPIP06744 558 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 CTXN2P0C2S0 81 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RNH1P13489 461 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 COX5AP20674 150 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 CALCRP30988 508 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RBM34P42696 430 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 YAP1P46937 504 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 TGM4P49221 684 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 PRLHRP49683 370 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RPL14P50914 215 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 PRKXP51817 358 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RPL10AP62906 217 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 RPS27AP62979 156 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 SRSF1Q07955 248 aaKnown RBP eCLIP3.4□□□□□ -1.86
SKP1-209ENST00000522552 TPBGQ13641 420 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 GNMTQ14749 295 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 NFATC4Q14934 902 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 EMC2Q15006 297 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 SIRPB2Q5JXA9 342 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 DCST2Q5T1A1 773 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 FAM199XQ6PEV8 388 aaPredicted RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 TUBA3EQ6PEY2 450 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 PGAP1Q75T13 922 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 IFNEQ86WN2 208 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 OR5B3Q8NH48 314 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 OR5K2Q8NHB8 316 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 ACER1Q8TDN7 264 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 ESR2Q92731 530 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 OTUB2Q96DC9 234 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RAB3CQ96E17 227 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 DNAJC1Q96KC8 554 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 APOL2Q9BQE5 337 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 TIMM29Q9BSF4 260 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 MMP28Q9H239 520 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 R3HDMLQ9H3Y0 253 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 PLEKHA1Q9HB21 404 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 ZBTB20Q9HC78 741 aaPredicted RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 MEPEQ9NQ76 525 aaPredicted RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 APOBEC3BQ9UH17 382 aaKnown RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 TMCO1Q9UM00 188 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 ERVW-1Q9UQF0 538 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.87
SKP1-209ENST00000522552 SMIM35A0A1B0GVV1 85 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR5B21A6NL26 309 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GOLGA8JA6NMD2 632 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 H0YHG0 523 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CLDN34H7C241 214 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GPX5O75715 221 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TNFAIP8O95379 198 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 DEXIO95424 95 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 IGHV4-39P01824 125 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 RPLP0P05388 317 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 CD3GP09693 182 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 PET100P0DJ07 73 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FOXN2P32314 431 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 HMGCLP35914 325 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 LEPP41159 167 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 MAGEA2P43356 314 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 RFX2P48378 723 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 XKP51811 444 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 PEX3P56589 373 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ARL16Q0P5N6 197 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 C2orf80Q0P641 193 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 BNIP2Q12982 314 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR5I1Q13606 314 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 MAD2L1BPQ15013 274 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 OXA1LQ15070 435 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TTMPQ5BVD1 217 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 SEL1L2Q5TEA6 688 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FAHD1Q6P587 224 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 EMBQ6PCB8 327 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TTC33Q6PID6 262 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 ISCA2Q86U28 154 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TMEM25Q86YD3 366 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TMEM156Q8N614 296 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 SEMA6DQ8NFY4 1073 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR5M1Q8NGP8 315 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 SLC7A13Q8TCU3 470 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 STMN2Q93045 179 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 DCUN1D5Q9BTE7 237 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 RSG1Q9BU20 258 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 NAT10Q9H0A0 1025 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 RBKSQ9H477 322 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 NMUR1Q9HB89 426 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 THUMPD1Q9NXG2 353 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 NUDT4Q9NZJ9 180 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 C3orf18Q9UK00 162 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 UBQLN1Q9UMX0 589 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 COPS3Q9UNS2 423 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CFL2Q9Y281 166 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 PLLPQ9Y342 182 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TESMINQ9Y4I5 508 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TBL2Q9Y4P3 447 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 NCANO14594 1321 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 IGLV5-45A0A087WSX0 123 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TRBV7-9A0A0J9YWB2 115 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms