RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF837Q96EG3 531 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-209ENST00000522243 MCHR1Q99705 422 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 KCNS3Q9BQ31 491 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 VIPAS39Q9H9C1 493 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 SEC61A2Q9H9S3 476 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 ARGLU1Q9NWB6 273 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-209ENST00000522243 TRIM33Q9UPN9 1127 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 CSPG4Q6UVK1 2322 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 PLCE1Q9P212 2302 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 ARPC4-TTLL3A0A0A6YYG9 625 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 KIAA1324LA8MWY0 1029 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-209ENST00000522243 LRRN3E7EW58 273 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 TRAF3IP2O43734 574 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-209ENST00000522243 GPRIN2O60269 458 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 SEC14L2O76054 403 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 BGLAPP02818 100 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 TP53P04637 393 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-209ENST00000522243 HLA-DOBP13765 273 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-209ENST00000522243 CHRNB3Q05901 458 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 DUSP7Q16829 419 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 CEACAM16Q2WEN9 425 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 PHYHD1Q5SRE7 291 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 CLEC2AQ6UVW9 174 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 RANBP3LQ86VV4 465 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-209ENST00000522243 UEVLDQ8IX04 471 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 C10orf53Q8N6V4 93 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 STON2Q8WXE9 905 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 OR2M2Q96R28 347 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 EPYCQ99645 322 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 EMC6Q9BV81 110 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 GPR35Q9HC97 309 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
SDCBP-209ENST00000522243 RPL36A-HNRNPH2H7BZ11 118 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 H7C417 338 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 LY6HO94772 140 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 CECR9P0C854 216 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 PCBP3P57721 371 aaKnown RBP18.02■□□□□ 0.48
SDCBP-209ENST00000522243 MST1LQ2TV78 715 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 VHLLQ6RSH7 139 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 GPR32P1Q8NGA4 272 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 OR10H5Q8NGA6 315 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 MAGEE2Q8TD90 523 aaPredicted RBP18.02■□□□□ 0.48
SDCBP-209ENST00000522243 SLC41A3Q96GZ6 507 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 TXNDC15Q96J42 360 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 MOGAT1Q96PD6 335 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 ARHGDIGQ99819 225 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 ASPNQ9BXN1 380 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 CRLF2Q9HC73 371 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 YAE1D1Q9NRH1 226 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 PMF1-BGLAPU3KQ54 211 aa18.02■□□□□ 0.48
SDCBP-209ENST00000522243 CHD3Q12873 2000 aaKnown RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 NSD1Q96L73 2696 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 CPSF4LA6NMK7 179 aaKnown RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 M0R3G1 203 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 AKAP8O43823 692 aaKnown RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 SASH3O75995 380 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 CRYAAP02489 173 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 CELA3BP08861 270 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 CALCRP30988 508 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 SH3BGRP55822 239 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 NAAAQ02083 359 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 RBBP4Q09028 425 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 SF3A3Q12874 501 aaKnown RBP eCLIP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 PMS2P3Q13401 168 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 MFSD13AQ14CX5 517 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 NPTX1Q15818 432 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 ADPRHL1Q8NDY3 354 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 PIK3C3Q8NEB9 887 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 OR10A6Q8NH74 314 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 VANGL1Q8TAA9 524 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 MED29Q9NX70 200 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 CRNNQ9UBG3 495 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-209ENST00000522243 HIVEP2P31629 2446 aa18.01■□□□□ 0.47
SDCBP-209ENST00000522243 LOC102725191A0A1B0GVB3 256 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 ZNF503-AS2A6NEH8 195 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 CD5LO43866 347 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 CRLF1O75462 422 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 SERPINI2O75830 405 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 BMP4P12644 408 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 IDH3GP51553 393 aaPredicted RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 POU3F1Q03052 451 aaPredicted RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 SWI5Q1ZZU3 235 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 ENTPD8Q5MY95 495 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 MYPOPQ86VE0 399 aaPredicted RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 RBM45Q8IUH3 476 aaKnown RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 WDFY1Q8IWB7 410 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 TMEM123Q8N131 208 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 OR4D11Q8NGI4 311 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 OR6T1Q8NGN1 323 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 OR6S1Q8NH40 331 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 ZNF317Q96PQ6 595 aaPredicted RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 KATNB1Q9BVA0 655 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 TMEM120AQ9BXJ8 343 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 KAT8Q9H7Z6 458 aaKnown RBP18■□□□□ 0.47
SDCBP-209ENST00000522243 EVA1AQ9H8M9 152 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 CA10Q9NS85 328 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 CORINQ9Y5Q5 1042 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 ARFGEF3Q5TH69 2177 aa18■□□□□ 0.47
SDCBP-209ENST00000522243 A0A096LNT2 108 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms