RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 DNPH1O43598 174 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 IDH3BO43837 385 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 RPSAP08865 295 aaKnown RBP19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 ENPP1P22413 925 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 AGFG1P52594 562 aaKnown RBP19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 SNRPGP62308 76 aaKnown RBP19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 FAM180AQ6UWF9 173 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 EXD3Q8N9H8 876 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 TMEM163Q8TC26 289 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 FBLIM1Q8WUP2 373 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 Q96M85 177 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 UCN2Q96RP3 112 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF346Q9UL40 294 aaKnown RBP19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 TEX13CA0A0J9YWL9 993 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 A0A1W2PRG6 482 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 ARPC3O15145 178 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 RAMP1O60894 148 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 IFNGP01579 166 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 HLA-DOBP13765 273 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 APEHP13798 732 aaKnown RBP19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 GABRB1P18505 474 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 FMO3P31513 532 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 P2RY4P51582 365 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 CHN2P52757 468 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 RPS3AP61247 264 aaKnown RBP19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 H3F3AP84243 136 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 EFNB1P98172 346 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 C3AR1Q16581 482 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 C6orf141Q5SZD1 244 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 GPAT4Q86UL3 456 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 LSM14AQ8ND56 463 aaKnown RBP19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 ANKK1Q8NFD2 765 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 OR52E2Q8NGJ4 325 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 OR4K13Q8NH42 304 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 APH1BQ8WW43 257 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 OTULINQ96BN8 352 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 RASD2Q96D21 266 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF845Q96IR2 970 aaPredicted RBP19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 TSPAN32Q96QS1 320 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 NR1H4Q96RI1 486 aaPredicted RBP19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 CMC2Q9NRP2 79 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 CLN6Q9NWW5 311 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 CAMK2AQ9UQM7 478 aa19.12■□□□□ 0.65
R3HCC1-208ENST00000522012 A0A1B0GVC2 190 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 A0A1W2PNV4 684 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 IMPA2O14732 288 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 WBP4O75554 376 aaKnown RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 SMNDC1O75940 238 aaKnown RBP eCLIP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 HIST1H1CP16403 213 aaKnown RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 SDHAP31040 664 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 HSF1Q00613 529 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 POU3F1Q03052 451 aaPredicted RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 C1DQ13901 141 aaKnown RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 ACKR1Q16570 336 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF239Q16600 458 aaKnown RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 GPR139Q6DWJ6 353 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 FAM122BQ7Z309 247 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 BCDIN3DQ7Z5W3 292 aaKnown RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 PXKQ7Z7A4 578 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 TEX19Q8NA77 164 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 ROBO4Q8WZ75 1007 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 CPNE4Q96A23 557 aaPredicted RBP19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 WDYHV1Q96HA8 205 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 OXGR1Q96P68 337 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 KLHL13Q9P2N7 655 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 KLHL21Q9UJP4 597 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 RASD1Q9Y272 281 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 CACNA1GO43497 2377 aa19.11■□□□□ 0.65
R3HCC1-208ENST00000522012 AQP7O14520 342 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 SMAD9O15198 467 aaKnown RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 CPN1P15169 458 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF3P17036 446 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 SMN1Q16637 294 aaKnown RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 LAIR2Q6ISS4 152 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 CHMP1BQ7LBR1 199 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 UEVLDQ8IX04 471 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 FAM26EQ8N5C1 309 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 Q8NA96 180 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 LRR1Q96L50 414 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 TXNIPQ9H3M7 391 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 FANCFQ9NPI8 374 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 DNAJC27Q9NZQ0 273 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 B3GAT1Q9P2W7 334 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 NOX1Q9Y5S8 564 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 SYNGR4O95473 234 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 TXNDC12O95881 172 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 IFNGR1P15260 489 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 ACVR2AP27037 513 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 RPL27P61353 136 aaKnown RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 MELKQ14680 651 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 EMC4Q5J8M3 183 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF362Q5T0B9 420 aaPredicted RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 SLC35D2Q76EJ3 337 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 JAZF1Q86VZ6 243 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 GHDCQ8N2G8 530 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 CISD2Q8N5K1 135 aaKnown RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 SDR9C7Q8NEX9 313 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 BPIFB6Q8NFQ5 453 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 HDAC2Q92769 488 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms