RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 EIF2B1Q14232 305 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 GPR139Q6DWJ6 353 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 TIGD4Q8IY51 512 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 EDAQ92838 391 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 OR5B2Q96R09 309 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 S100A13Q99584 98 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 VN1R1Q9GZP7 353 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 RANGRFQ9HD47 186 aaPredicted RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 PLEKHB1Q9UF11 243 aaPredicted RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 DHDHQ9UQ10 334 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 PTRH2Q9Y3E5 179 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 NPFFR2Q9Y5X5 522 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 TRAV36DV7A0A075B6V5 113 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 DCDC2BA2VCK2 349 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 G3V3Y1 287 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 NUDT21O43809 227 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 KRT33AO76009 404 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 IL33O95760 270 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 HSD11B1P28845 292 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 FAUP35544 74 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 ETV6P41212 452 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 EVX1P49640 407 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 SF3A2Q15428 464 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 SLC25A30Q5SVS4 291 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 FHL5Q5TD97 284 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 PRSS45Q7RTY3 260 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 OR2I1PQ8NGU4 316 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 LGALS14Q8TCE9 139 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 FCAMRQ8WWV6 532 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 CLEC4MQ9H2X3 399 aaPredicted RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 PLEKHA1Q9HB21 404 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 V9GY05 133 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 OIP5O43482 229 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TRAPPC6AO75865 159 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 FGF9P31371 208 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 SLC6A9P48067 706 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 CLRN1P58418 232 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SNRPD2P62316 118 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 GALK2Q01415 458 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 GLO1Q04760 184 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 MGAT2Q10469 447 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 COL28A1Q2UY09 1125 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SLC25A35Q3KQZ1 300 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 C1QL3Q5VWW1 255 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SLC25A25Q6KCM7 469 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 OR8H1Q8NGG4 311 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 GPR148Q8TDV2 347 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TSPAN10Q9H1Z9 355 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 CCDC86Q9H6F5 360 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 ERVMER34-1Q9H9K5 563 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ADGRL4Q9HBW9 690 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 EXOGQ9Y2C4 368 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 DENND4CQ5VZ89 1909 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TP53I11O14683 189 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TOXO94900 526 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 GIFP27352 417 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SRP9P49458 86 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 ART1P52961 327 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ZNF141Q15928 474 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 MEP1BQ16820 701 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 C6orf183Q5T699 404 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 C1orf140Q5VVS0 124 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 RAET1LQ5VY80 246 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 GUSBP11Q6P575 273 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 OR5M1Q8NGP8 315 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ZNF417Q8TAU3 575 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SLC22A8Q8TCC7 542 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TMEM106AQ96A25 262 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 FAM210AQ96ND0 272 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ZNF587Q96SQ5 575 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 ATF6BQ99941 703 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 RBFOX1Q9NWB1 397 aaKnown RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 NOX1Q9Y5S8 564 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 PLXND1Q9Y4D7 1925 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 OBSL1O75147 1896 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 BPTFQ12830 3046 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TRIM64BA6NI03 449 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 IMPA2O14732 288 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ALOX12BO75342 701 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ZFAND5O76080 213 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 GPANK1O95872 356 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 RAB14P61106 215 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TOMM34Q15785 309 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 SGCAQ16586 387 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SLC7A5P1Q8MH63 180 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 CEP76Q8TAP6 659 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 PTPMT1Q8WUK0 201 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 TNFAIP8L1Q8WVP5 186 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 ATG5Q9H1Y0 275 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 NRIP3Q9NQ35 241 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 TMEM184BQ9Y519 407 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 CACNG2Q9Y698 323 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SIRT4Q9Y6E7 314 aaPredicted RBP9.26□□□□□ -0.93
MCF2-209ENST00000520602 PLXNA2O75051 1894 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 SDK2Q58EX2 2172 aa9.26□□□□□ -0.93
MCF2-209ENST00000520602 LOC100509620A0A075B734 347 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms