RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 GRPRP30550 384 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 IDH3GP51553 393 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 EFNB3Q15768 340 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 MYPOPQ86VE0 399 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 COMTD1Q86VU5 262 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 KRT73Q86Y46 540 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 ARIH2OSQ8N7S6 290 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 FAM169BQ8N8A8 192 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 LSMEM1Q8N8F7 131 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 FOXN4Q96NZ1 517 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 RSPO3Q9BXY4 272 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 TMBIM4Q9HC24 238 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 CRLF2Q9HC73 371 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 TCF7L2Q9NQB0 619 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 YLPM1P49750 1951 aaKnown RBP13.16□□□□□ -0.3
CSMD1-207ENST00000520451 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 TRAV36DV7A0A075B6V5 113 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 IGHV4-61A0A0C4DH41 118 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 AKAP8O43823 692 aaKnown RBP13.16□□□□□ -0.3
CSMD1-207ENST00000520451 CBR1P16152 277 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 CAPZA2P47755 286 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 MRPL19P49406 292 aaKnown RBP13.16□□□□□ -0.3
CSMD1-207ENST00000520451 PPOXP50336 477 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 NCALDP61601 193 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 HGFACQ04756 655 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 NPRL3Q12980 569 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 IQCCQ4KMZ1 466 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 ALG10BQ5I7T1 473 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 LRIF1Q5T3J3 769 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 H1FNTQ75WM6 255 aaPredicted RBP13.16□□□□□ -0.3
CSMD1-207ENST00000520451 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 C10orf111Q8N326 155 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 NUP37Q8NFH4 326 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF837Q96EG3 531 aaPredicted RBP13.16□□□□□ -0.3
CSMD1-207ENST00000520451 OR2M2Q96R28 347 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 SPATA5L1Q9BVQ7 753 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 PRR14Q9BWN1 585 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 RAB1BQ9H0U4 201 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 SELENONQ9NZV5 590 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 SLAMF8Q9P0V8 285 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 KLHL14Q9P2G3 628 aa13.16□□□□□ -0.3
CSMD1-207ENST00000520451 IGHV2OR16-5A0A0B4J2B6 119 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF503-AS2A6NEH8 195 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 M0R3G1 203 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 TPST1O60507 370 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 NQO1P15559 274 aaKnown RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 NPR2P20594 1047 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 IGFBP5P24593 272 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 THBS4P35443 961 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 ARR3P36575 388 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 CDK6Q00534 326 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 CARD17Q5XLA6 110 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 BLOC1S3Q6QNY0 202 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 NET1Q7Z628 596 aaPredicted RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 MDP1Q86V88 176 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 TMEM123Q8N131 208 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 SVOPLQ8N434 492 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 MSI2Q96DH6 328 aaKnown RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 SPDL1Q96EA4 605 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF442Q9H7R0 627 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 CCDC167Q9P0B6 97 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 VAPAQ9P0L0 249 aa13.15□□□□□ -0.3
CSMD1-207ENST00000520451 TESQ9UGI8 421 aaKnown RBP13.15□□□□□ -0.3
CSMD1-207ENST00000520451 LOC102725191A0A1B0GVB3 256 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 ZNF99A8MXY4 864 aaPredicted RBP13.14□□□□□ -0.31
CSMD1-207ENST00000520451 ERLIN1O75477 346 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 TGDSO95455 350 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 HPRP00739 348 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
CSMD1-207ENST00000520451 HLA-DOBP13765 273 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 SRD5A1P18405 259 aa13.14□□□□□ -0.31
CSMD1-207ENST00000520451 IDH3AP50213 366 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms