RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PEX19P40855 299 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 SELENOPP49908 381 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 ERFP50548 548 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 CHRNB3Q05901 458 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 MS4A18Q3C1V0 323 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 IQCCQ4KMZ1 466 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 ANKRD34AQ69YU3 496 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 NIPAL3Q6P499 406 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 TBPL2Q6SJ96 375 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 STAC2Q6ZMT1 411 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 RRM2BQ7LG56 351 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 ACBD4Q8NC06 268 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
HPS4-218ENST00000519774 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 ANKRD19PQ9H560 264 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 IL1RAPQ9NPH3 570 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 CRIM1Q9NZV1 1036 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 UPB1Q9UBR1 384 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 SLC7A8Q9UHI5 535 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 POMPQ9Y244 141 aa10.48□□□□□ -0.73
HPS4-218ENST00000519774 FLNBO75369 2602 aaKnown RBP10.47□□□□□ -0.73
HPS4-218ENST00000519774 A0A1W2PRQ8 180 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 BLOC1S5-TXNDC5H3BN57 136 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 EBAG9O00559 213 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 RNF13O43567 381 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 AKAP8O43823 692 aaKnown RBP10.47□□□□□ -0.73
HPS4-218ENST00000519774 LYZL6O75951 148 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 KRT33AO76009 404 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 GADD45GO95257 159 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 ASAH2BP0C7U1 165 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 MAKP20794 623 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 IL32P24001 234 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 RRM2P31350 389 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 GPR4P46093 362 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 SMIM11AP58511 58 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 FAPQ12884 760 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 DGCR6Q14129 220 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 FAM98BQ52LJ0 330 aaKnown RBP10.47□□□□□ -0.73
HPS4-218ENST00000519774 TSPO2Q5TGU0 170 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 C9orf135Q5VTT2 229 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 CARD17Q5XLA6 110 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 FBXW9Q5XUX1 488 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 PODNL1Q6PEZ8 512 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 Q6ZT83 130 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 MBOAT2Q6ZWT7 520 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 GABRG1Q8N1C3 465 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 SLC7A13Q8TCU3 470 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 ZC3HAV1LQ96H79 300 aaKnown RBP10.47□□□□□ -0.73
HPS4-218ENST00000519774 ZNF347Q96SE7 839 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 MED18Q9BUE0 208 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 MAGIXQ9H6Y5 334 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 MED29Q9NX70 200 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 AURKCQ9UQB9 309 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 NOX1Q9Y5S8 564 aa10.47□□□□□ -0.73
HPS4-218ENST00000519774 ANKHD1Q8IWZ3 2542 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 DHRS12A0PJE2 317 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 SH3D21A4FU49 640 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 AQP12BA6NM10 295 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 EFCAB9A8MZ26 197 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 SLC43A1O75387 559 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 IGF2P01344 180 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 IGHV1-2P23083 117 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 AQP2P41181 271 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 MAGEA2P43356 314 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 FOXG1P55316 489 aaPredicted RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 PRKCDQ05655 676 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 LGALS3BPQ08380 585 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ITGADQ13349 1161 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 MELKQ14680 651 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 P2RY6Q15077 328 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 SEC23BQ15437 767 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 BHLHA15Q7RTS1 189 aaPredicted RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 PIWIL3Q7Z3Z3 882 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 PXKQ7Z7A4 578 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 AQP12AQ8IXF9 295 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ADGRG5Q8IZF4 528 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 CDK20Q8IZL9 346 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 RNF113BQ8IZP6 322 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 OR4K5Q8NGD3 323 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 OR13C2Q8NGS9 318 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 MOSPD2Q8NHP6 518 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 FAM222BQ8WU58 562 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 KISS1RQ969F8 398 aaPredicted RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 FAM46AQ96IP4 442 aaKnown RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 TXNDC15Q96J42 360 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 DHRS1Q96LJ7 313 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ALKBH3Q96Q83 286 aaPredicted RBP10.46□□□□□ -0.73
HPS4-218ENST00000519774 EMC6Q9BV81 110 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.73
HPS4-218ENST00000519774 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms