RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 KLF10Q13118 480 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 NFYCQ13952 458 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CYLC2Q14093 348 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 PGGHGQ32M88 737 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ELOA3BQ3SY89 546 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF672Q499Z4 452 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 OR7E24Q6IFN5 339 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CORO6Q6QEF8 472 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CASP12Q6UXS9 341 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 LINGO2Q7L985 606 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SSX8Q7RTT4 187 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 GPAT4Q86UL3 456 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 RBM45Q8IUH3 476 aaKnown RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ARMC8Q8IUR7 673 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 C11orf65Q8NCR3 313 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ELOA3Q8NG57 546 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 OR4D11Q8NGI4 311 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SMAP2Q8WU79 429 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 DNAJA4Q8WW22 397 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 IPCEF1Q8WWN9 437 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SLC47A1Q96FL8 570 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 COG8Q96MW5 612 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 OXGR1Q96P68 337 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ARHGDIGQ99819 225 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SMR3AQ99954 134 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 NCOR1P1Q9H4R4 102 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 TMEM27Q9HBJ8 222 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SLC17A5Q9NRA2 495 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 FGFR1OP2Q9NVK5 253 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CISD1Q9NZ45 108 aaKnown RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 RPS6KB2Q9UBS0 482 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SEC14L4Q9UDX3 406 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 LAMP3Q9UQV4 416 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CADP27708 2225 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ARID1AO14497 2285 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 A0A1B0GX12 115 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 E7EQL1 145 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 SULT1B1O43704 296 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 UPK3AO75631 287 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF432O94892 652 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 LYPD3O95274 346 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 AHSA1O95433 338 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 NPPAP01160 153 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 BGLAPP02818 100 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 OPN1SWP03999 348 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 THY1P04216 161 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CD247P20963 164 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 GRPRP30550 384 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF83P51522 516 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CRYBA2P53672 197 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CDH12P55289 794 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 RIPPLY3P57055 190 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CBX3Q13185 183 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 NPTX1Q15818 432 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 NRF1Q16656 503 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 VMACQ2NL98 169 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 RABL3Q5HYI8 236 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ALG10BQ5I7T1 473 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 FAM69AQ5T7M9 428 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 H1FNTQ75WM6 255 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-215ENST00000519474 BTN2A1Q7KYR7 527 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 YTHDF3Q7Z739 585 aaKnown RBP8.19□□□□□ -1.1
HDAC3-215ENST00000519474 TSPYL5Q86VY4 417 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CALHM3Q86XJ0 350 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 POMGNT2Q8NAT1 580 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 KBTBD8Q8NFY9 601 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 OR6T1Q8NGN1 323 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 OR6S1Q8NH40 331 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 TMEM171Q8WVE6 324 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 BCL2L2Q92843 193 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-215ENST00000519474 LRRC58Q96CX6 371 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 PERPQ96FX8 193 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 SLC41A3Q96GZ6 507 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 C18orf12Q96KH6 178 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 Q96MF0 132 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF583Q96ND8 569 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 MCHR1Q99705 422 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 SLCO5A1Q9H2Y9 848 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 CCDC134Q9H6E4 229 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 EVA1AQ9H8M9 152 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 B3GAT1Q9P2W7 334 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 USP22Q9UPT9 525 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 ALPK2Q86TB3 2170 aa8.19□□□□□ -1.1
HDAC3-215ENST00000519474 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 LRRN3E7EW58 273 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 M0R082 166 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 M0R3H8 397 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 FXYD1O00168 92 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ABCD4O14678 606 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 HPRP00739 348 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 INHBBP09529 407 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF43P17038 809 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 CDH2P19022 906 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 PTNP21246 168 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms