RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 EFNB2P52799 333 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 MRPS10P82664 201 aaKnown RBP11.31□□□□□ -0.6
PCM1-203ENST00000517545 ILF3Q12906 894 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCM1-203ENST00000517545 PDSS1Q5T2R2 415 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 OR8S1Q8NH09 359 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 DUSP19Q8WTR2 217 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 NARS2Q96I59 477 aaKnown RBP11.31□□□□□ -0.6
PCM1-203ENST00000517545 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
PCM1-203ENST00000517545 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 EDDM13A0A1B0GTR0 161 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 HIDE1A8MVS5 230 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 RBBP9O75884 186 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 AQP8O94778 261 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 OR8G3PP0DMU2 310 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 SPI1P17947 270 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 GABRA3P34903 492 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 RPL4P36578 427 aaKnown RBP11.31□□□□□ -0.6
PCM1-203ENST00000517545 MC2RQ01718 297 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 ZNF234Q14588 700 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 ODF4Q2M2E3 257 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 C4orf46Q504U0 113 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 LRRN1Q6UXK5 716 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
PCM1-203ENST00000517545 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
PCM1-203ENST00000517545 CACNA1CQ13936 2221 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 H7C417 338 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 CD1AP06126 327 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 CALCBP10092 127 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 CPMP14384 443 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 GMFBP60983 142 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 ERVK-25P63136 954 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 LTBQ06643 244 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 FHL5Q5TD97 284 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
PCM1-203ENST00000517545 PHYHIPQ92561 330 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 TSSK2Q96PF2 358 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 C19orf53Q9UNZ5 99 aaPredicted RBP11.3□□□□□ -0.6
PCM1-203ENST00000517545 ALPK2Q86TB3 2170 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 ADH1AP07327 375 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 RPL35P42766 123 aaKnown RBP11.3□□□□□ -0.6
PCM1-203ENST00000517545 ZNF425Q6IV72 752 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 OR10AC1Q8NH08 325 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 BARX1Q9HBU1 254 aaPredicted RBP11.3□□□□□ -0.6
PCM1-203ENST00000517545 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
PCM1-203ENST00000517545 P2RX6O15547 441 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 FKTNO75072 461 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 SNAPC5O75971 98 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 NDUFB2O95178 105 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 RPA2P15927 270 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 TSFMP43897 325 aaKnown RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 OR4E2Q8NGC2 313 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 NSMAFQ92636 917 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 GAL3ST3Q96A11 431 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 ZNF426Q9BUY5 554 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 CT62P0C5K7 136 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 GTF2F2P13984 249 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 ACAA2P42765 397 aaKnown RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 AKR1D1P51857 326 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 GAS6Q14393 721 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 BEX5Q5H9J7 111 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 PABPC1L2AQ5JQF8 200 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 TMEM88Q6PEY1 159 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 LRRTM1Q86UE6 522 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 SLC35F3Q8IY50 421 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 OR6N1Q8NGY5 312 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 FGF13Q92913 245 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 ZNF75AQ96N20 296 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 TMEM72A0PK05 275 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 BRINP1O60477 761 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 CD3DP04234 171 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 CMPK1P30085 196 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 FLI1Q01543 452 aaPredicted RBP11.29□□□□□ -0.6
PCM1-203ENST00000517545 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 WFIKKN2Q8TEU8 576 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 RSPRY1Q96DX4 576 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 EXO5Q9H790 373 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 RASL12Q9NYN1 266 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 FRRS1LQ9P0K9 344 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 GMEB2Q9UKD1 530 aa11.29□□□□□ -0.6
PCM1-203ENST00000517545 SLC6A5Q9Y345 797 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms