RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KTI12Q96EK9 354 aaPredicted RBP12.99□□□□□ -0.33
DDR1-278ENST00000515233 WDR55Q9H6Y2 383 aaPredicted RBP12.99□□□□□ -0.33
DDR1-278ENST00000515233 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
DDR1-278ENST00000515233 TMEM247A6NEH6 219 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 ZNF503-AS2A6NEH8 195 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 IDO1P14902 403 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
DDR1-278ENST00000515233 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
DDR1-278ENST00000515233 EVX1P49640 407 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 DAG1Q14118 895 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 ADRM1Q16186 407 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 ZNF311Q5JNZ3 666 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 RPS26P11Q5JNZ5 115 aaPredicted RBP12.98□□□□□ -0.33
DDR1-278ENST00000515233 FAM69AQ5T7M9 428 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 MSANTD1Q6ZTZ1 278 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 GPR137CQ8N3F9 429 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 CKAP2Q8WWK9 683 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 MAELQ96JY0 434 aaKnown RBP12.98□□□□□ -0.33
DDR1-278ENST00000515233 RMND5AQ9H871 391 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 CACYBPQ9HB71 228 aaKnown RBP12.98□□□□□ -0.33
DDR1-278ENST00000515233 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 BCL2L10Q9HD36 194 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 THAP1Q9NVV9 213 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 B3GNT2Q9NY97 397 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 SEC14L4Q9UDX3 406 aa12.98□□□□□ -0.33
DDR1-278ENST00000515233 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 ZNF99A8MXY4 864 aaPredicted RBP12.97□□□□□ -0.33
DDR1-278ENST00000515233 AIM2O14862 343 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 IFNGR1P15260 489 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 PCMT1P22061 227 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 NR4A1P22736 598 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 DVL1P1P54792 670 aaPredicted RBP12.97□□□□□ -0.33
DDR1-278ENST00000515233 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
DDR1-278ENST00000515233 MDP1Q86V88 176 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 TMEM123Q8N131 208 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 TAAR8Q969N4 342 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 VPS33AQ96AX1 596 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 ITCHQ96J02 903 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 LRR1Q96L50 414 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 OR2M2Q96R28 347 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 DYNLRB1Q9NP97 96 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 ZIM2Q9NZV7 527 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 USP22Q9UPT9 525 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
DDR1-278ENST00000515233 SLCO1B7G3V0H7 640 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 M0R082 166 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 TRAF3IP2O43734 574 aaPredicted RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 AKAP8O43823 692 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 SNNO75324 88 aaPredicted RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 ADRA2AP08913 450 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 BMP2P12643 396 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 SRP14P37108 136 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 HOXC5Q00444 222 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 NPRL3Q12980 569 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 SNTB2Q13425 540 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 RGNQ15493 299 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 TRIP10Q15642 601 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 GTDC1Q4AE62 458 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 DEF8Q6ZN54 512 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 MEX3DQ86XN8 651 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 ZNF417Q8TAU3 575 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 SLC38A4Q969I6 547 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 ZNF587Q96SQ5 575 aaPredicted RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 RSPO3Q9BXY4 272 aaPredicted RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 MS4A5Q9H3V2 200 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 SDR39U1Q9NRG7 319 aaPredicted RBP12.96□□□□□ -0.33
DDR1-278ENST00000515233 RPS6KB2Q9UBS0 482 aa12.96□□□□□ -0.33
DDR1-278ENST00000515233 A0A0A6YYJ9 748 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 B4DSR2 109 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 MS4A18H0YCH9 400 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 SYNGR3O43761 229 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 ZNF35P13682 527 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 ETS2P15036 469 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 ITGA2P17301 1181 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 GRPRP30550 384 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 FADDQ13158 208 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 MFSD13AQ14CX5 517 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 MS4A18Q3C1V0 323 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 PHYHD1Q5SRE7 291 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 KRT80Q6KB66 452 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 C20orf196Q8IYI0 205 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 OR6S1Q8NH40 331 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 DNAJA4Q8WW22 397 aaPredicted RBP12.95□□□□□ -0.34
DDR1-278ENST00000515233 GTF2H4Q92759 462 aa12.95□□□□□ -0.34
DDR1-278ENST00000515233 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
DDR1-278ENST00000515233 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
DDR1-278ENST00000515233 MRPL37Q9BZE1 423 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms